RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 OR5B21A6NL26 309 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 IFNGP01579 166 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 RBP4P02753 201 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 TK1P04183 234 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 FABP3P05413 133 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 ZNF728P0DKX0 622 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 GSTT1P30711 240 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 DLX6P56179 175 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 LDLRAD2Q5SZI1 272 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 MINOS1Q5TGZ0 78 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 HACD2Q6Y1H2 254 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 MOB3CQ70IA8 216 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 C16orf82Q7Z2V1 217 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 POC1AQ8NBT0 407 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 NDNFQ8TB73 568 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 THEM6Q8WUY1 208 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 AMELYQ99218 206 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 FGFR1OP2Q9NVK5 253 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 PCDHGB5Q9Y5G0 923 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 MINOS1-NBL1R4GNA1 71 aa11.58□□□□□ -0.56
SMC1A-204ENST00000463684 RIIAD1A6NNX1 92 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 FAM90A22PA8MWA6 464 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 GSC2O15499 205 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 NXPH2O95156 264 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 SEMG1P04279 462 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 LPLP06858 475 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 CCDC159P0C7I6 412 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 IGHV1-8P0DP01 117 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 JUNBP17275 347 aaPredicted RBP11.57□□□□□ -0.56
SMC1A-204ENST00000463684 CEBPDP49716 269 aaPredicted RBP11.57□□□□□ -0.56
SMC1A-204ENST00000463684 DMRTC1Q5HYR2 192 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 LINC01590Q5TEZ4 76 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 RASSF6Q6ZTQ3 369 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 MRPL41Q8IXM3 137 aaKnown RBP11.57□□□□□ -0.56
SMC1A-204ENST00000463684 OR2T33Q8NG76 320 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 OR8D4Q8NGM9 314 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 STMN2Q93045 179 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 OTULINQ96BN8 352 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 ZNF488Q96MN9 340 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 ZNF649Q9BS31 505 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 GORASP2Q9H8Y8 452 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 ABCD2Q9UBJ2 740 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 OR14J1Q9UGF5 321 aa11.57□□□□□ -0.56
SMC1A-204ENST00000463684 KRT36O76013 467 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 ZFPL1O95159 310 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 LYNP07948 512 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 ZNF3P17036 446 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 PSME3P61289 254 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 DGCR2P98153 550 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 IL18R1Q13478 541 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 ABCA11PQ4W5N1 156 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 PLCXD3Q63HM9 321 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 KRT74Q7RTS7 529 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 OR9Q2Q8NGE9 314 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 OR8B12Q8NGG6 310 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 ITFG2Q969R8 447 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 OR8B4Q96RC9 309 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 NIPAL2Q9H841 368 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 LIN7BQ9HAP6 207 aa11.56□□□□□ -0.56
SMC1A-204ENST00000463684 MEX3AA1L020 520 aaKnown RBP11.55□□□□□ -0.56
SMC1A-204ENST00000463684 NOS1APO75052 506 aaPredicted RBP11.55□□□□□ -0.56
SMC1A-204ENST00000463684 GASTP01350 101 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 PGA5P0DJD9 388 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 H2AFXP16104 143 aaPredicted RBP11.55□□□□□ -0.56
SMC1A-204ENST00000463684 BRS3P32247 399 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 HAAOP46952 286 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 EDDM3BP56851 147 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 ACTA2P62736 377 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 ACTG2P63267 376 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 ACTC1P68032 377 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 ACTA1P68133 377 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 CBX1P83916 185 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 RIPPLY1Q0D2K3 151 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 C10orf99Q6UWK7 81 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 GDPD3Q7L5L3 318 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 COMMD2Q86X83 199 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 ZNF573Q86YE8 665 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 ZNF454Q8N9F8 522 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 ASCC1Q8N9N2 400 aaKnown RBP11.55□□□□□ -0.56
SMC1A-204ENST00000463684 BTBD10Q9BSF8 475 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 MED20Q9H944 212 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 SPAG4Q9NPE6 437 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 IL1RAPQ9NPH3 570 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 POLDIP2Q9Y2S7 368 aa11.55□□□□□ -0.56
SMC1A-204ENST00000463684 J3QT63 122 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 K7N7A8 449 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 TNFRSF11BO00300 401 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 CCDC22O60826 627 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 RAMP3O60896 148 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 DNAJC8O75937 253 aaPredicted RBP11.54□□□□□ -0.56
SMC1A-204ENST00000463684 ATP6V1B1P15313 513 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 ARHGDIBP52566 201 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 HMGA2P52926 109 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 PSMA6P60900 246 aaKnown RBP11.54□□□□□ -0.56
SMC1A-204ENST00000463684 DOC2BQ14184 412 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 ZNF684Q5T5D7 378 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 CGB2Q6NT52 195 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 ZBTB49Q6ZSB9 765 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 RNF148Q8N7C7 305 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 ZNF676Q8N7Q3 588 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms