RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ZNF14P17017 642 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 HNF1AP20823 631 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 PAICSP22234 425 aaKnown RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 CRABP1P29762 137 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 HOXD3P31249 432 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 TTKP33981 857 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 TGFBR2P37173 567 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 OPRL1P41146 370 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 IDH3GP51553 393 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 PRKXP51817 358 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 EFNA4P52798 201 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 GLO1Q04760 184 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RAB40BQ12829 278 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 HNF4GQ14541 408 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 NEDD8Q15843 81 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 ODF4Q2M2E3 257 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 SNAI3Q3KNW1 292 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 CDONQ4KMG0 1287 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 DMRTC1Q5HYR2 192 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 TEX30Q5JUR7 227 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RBM48Q5RL73 367 aaKnown RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 ASPHD2Q6ICH7 369 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF773Q6PK81 442 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF322Q6U7Q0 402 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 KCTD8Q6ZWB6 473 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RFPL4BQ6ZWI9 263 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 BHLHA15Q7RTS1 189 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 SLC16A14Q7RTX9 510 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 PRSS48Q7RTY5 328 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF101Q8IZC7 436 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RDH10Q8IZV5 341 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF525Q8N782 197 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RNF133Q8WVZ7 376 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RORBQ92753 470 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RPL3LQ92901 407 aaKnown RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 TMEM80Q96HE8 168 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 CYYR1Q96J86 154 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 NKX3-1Q99801 234 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 CCDC90BQ9GZT6 254 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 OR51B6Q9H340 312 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 Q9H521 79 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RNF167Q9H6Y7 350 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 SIAEQ9HAT2 523 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 ELOVL3Q9HB03 270 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 NGBQ9NPG2 151 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 G6PC2Q9NQR9 355 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 GLRX2Q9NS18 164 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 CENPMQ9NSP4 180 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 LIN7CQ9NUP9 197 aaKnown RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 CNOT2Q9NZN8 540 aaKnown RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 MOKQ9UQ07 419 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RPL36Q9Y3U8 105 aaKnown RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 CADP27708 2225 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 ARPC4-TTLL3A0A0A6YYG9 625 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 DAPL1A0PJW8 107 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CIB4A0PJX0 185 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 OR6C6A6NF89 314 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 EFCAB10A6NFE3 127 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 OR5H1A6NKK0 313 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 E7EQL1 145 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 J3QLW9 94 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 NDUFS8O00217 210 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 TNFAIP8O95379 198 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 TGFAP01135 160 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 IGLV1-44P01699 117 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CST2P09228 141 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ACSM4P0C7M7 580 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CECR9P0C854 216 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CD79AP11912 226 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF19P17023 458 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 EEF1B2P24534 225 aaKnown RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 OTX1P32242 354 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CAPZA2P47755 286 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ALDH3B2P48448 385 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF83P51522 516 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 GABARAPL2P60520 117 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 RPS11P62280 158 aaKnown RBP eCLIP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 LSM6P62312 80 aaKnown RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 RPS25P62851 125 aaKnown RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 BSPH1Q075Z2 132 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 AQP6Q13520 282 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 P2RY6Q15077 328 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 RAB35Q15286 201 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 TBCEQ15813 527 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 TSTQ16762 297 aaKnown RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ALKBH6Q3KRA9 238 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 WDR38Q5JTN6 314 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 FAM27D1Q5T7N8 215 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 LCN1P1Q5VSP4 162 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 DNM1P34Q6PK57 102 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 USP43Q70EL4 1123 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 HDDC2Q7Z4H3 204 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 STX19Q8N4C7 294 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ACBD7Q8N6N7 88 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 KBTBD8Q8NFY9 601 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 TSPAN14Q8NG11 270 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 OR51A4Q8NGJ6 313 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 OR2AE1Q8NHA4 323 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms