RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CHMP5Q9NZZ3 219 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 PRO0628Q9UI54 55 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 ENPP4Q9Y6X5 453 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 TNS2Q63HR2 1409 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 A0A0G2JMP0 313 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 A0A0X1KG70 313 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 TMEM72A0PK05 275 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 YKT6O15498 198 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 NDUFS5O43920 106 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 NEMFO60524 1076 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 LHBP01229 141 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 IGLV2-8P01709 118 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 ZNF286BP0CG31 522 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 CCL2P13500 99 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 CD9P21926 228 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 IL3RAP26951 378 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 CASQ1P31415 396 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 KCNJ3P48549 501 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 TSPAN5P62079 268 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 GRB2P62993 217 aaKnown RBP1.75□□□□□ -2.13
HDAC6-212ENST00000461608 FUT5Q11128 374 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 PSG3Q16557 428 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 C18orf21Q32NC0 220 aaPredicted RBP1.75□□□□□ -2.13
HDAC6-212ENST00000461608 TTC32Q5I0X7 151 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 KDM4DQ6B0I6 523 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 ZFAND6Q6FIF0 208 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 FAHD1Q6P587 224 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 CASP12Q6UXS9 341 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 TRMT10CQ7L0Y3 403 aaKnown RBP1.75□□□□□ -2.13
HDAC6-212ENST00000461608 BBS7Q8IWZ6 715 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 NELFCDQ8IXH7 590 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 ZNF709Q8N972 641 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 NDNFQ8TB73 568 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 YIPF5Q969M3 257 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 CPNE4Q96A23 557 aaPredicted RBP1.75□□□□□ -2.13
HDAC6-212ENST00000461608 ZBED3Q96IU2 234 aaPredicted RBP1.75□□□□□ -2.13
HDAC6-212ENST00000461608 CIB1Q99828 191 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 CTRCQ99895 268 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 MRPL20Q9BYC9 149 aaKnown RBP1.75□□□□□ -2.13
HDAC6-212ENST00000461608 SHCBP1LQ9BZQ2 653 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 WFDC1Q9HC57 220 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 TAS2R5Q9NYW4 299 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 STMN3Q9NZ72 180 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 DNAJC27Q9NZQ0 273 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 ZNF835Q9Y2P0 537 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 WIF1Q9Y5W5 379 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 TUBGCP6Q96RT7 1819 aa1.75□□□□□ -2.13
HDAC6-212ENST00000461608 SCN1AP35498 2009 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 IGHV3OR16-8A0A075B7F1 116 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 A0A1W2PQ67 120 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 RAB19A4D1S5 217 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 BTNL10A8MVZ5 291 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 PRAMEF26H0Y7S4 382 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 K7ERQ8 282 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 UPK1AO00322 258 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 RNF113AO15541 343 aaKnown RBP1.74□□□□□ -2.13
HDAC6-212ENST00000461608 CDRT1O95170 752 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 PAX6P26367 422 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 P2RY2P41231 377 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 RANBP1P43487 201 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 GALR1P47211 349 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 IDH2P48735 452 aaKnown RBP1.74□□□□□ -2.13
HDAC6-212ENST00000461608 TTPAP49638 278 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 NUDT2P50583 147 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 RPL10AP62906 217 aaKnown RBP1.74□□□□□ -2.13
HDAC6-212ENST00000461608 TNNC1P63316 161 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 ATP5G2Q06055 141 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 IFFO1Q0D2I5 559 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 DYNC1I2Q13409 638 aaKnown RBP1.74□□□□□ -2.13
HDAC6-212ENST00000461608 MOBPQ13875 183 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 PMVKQ15126 192 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 SP6Q3SY56 376 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 KLHL12Q53G59 568 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 MRPL2Q5T653 305 aaKnown RBP1.74□□□□□ -2.13
HDAC6-212ENST00000461608 C6orf183Q5T699 404 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 APOBEC3HQ6NTF7 200 aaKnown RBP1.74□□□□□ -2.13
HDAC6-212ENST00000461608 MED27Q6P2C8 311 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 MORN3Q6PF18 240 aaPredicted RBP1.74□□□□□ -2.13
HDAC6-212ENST00000461608 FAM231DQ6ZW35 169 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 MIR7-3HGQ8N6C7 128 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 TMEM105Q8N8V8 129 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 ACBD4Q8NC06 268 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 OR2M7Q8NG81 312 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 OR8A1Q8NGG7 326 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 OR5H2Q8NGV7 314 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 TMEM239Q8WW34 195 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 CACNG8Q8WXS5 425 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 HGDQ93099 445 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 GABRG3Q99928 467 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 C20orf144Q9BQM9 153 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 UTP23Q9BRU9 249 aaKnown RBP1.74□□□□□ -2.13
HDAC6-212ENST00000461608 ZNF2Q9BSG1 426 aaPredicted RBP1.74□□□□□ -2.13
HDAC6-212ENST00000461608 COPS4Q9BT78 406 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 SCRT1Q9BWW7 348 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 SLC38A1Q9H2H9 487 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 ACOT13Q9NPJ3 140 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 ZNF302Q9NR11 478 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 SDHAF3Q9NRP4 125 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 AGPAT3Q9NRZ7 376 aa1.74□□□□□ -2.13
HDAC6-212ENST00000461608 TMEM100Q9NV29 134 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms