RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SRYQ05066 204 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 LIPEQ05469 1076 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 CYP51A1Q16850 503 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF630Q2M218 657 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF260Q3ZCT1 412 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 NSUN5P2Q63ZY6 315 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF324BQ6AW86 544 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 C1orf94Q6P1W5 598 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 GDPGP1Q6ZNW5 385 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 CALHM3Q86XJ0 350 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 MEX3DQ86XN8 651 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 MED12LQ86YW9 2145 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 TGIF2LXQ8IUE1 241 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 PDZD9Q8IXQ8 264 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF283Q8N7M2 679 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 C15orf54Q8N8G6 183 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 ZFP62Q8NB50 900 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 TMEM178AQ8NBL3 297 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 C17orf47Q8NEP4 570 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 OR2M3Q8NG83 312 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 GPR32P1Q8NGA4 272 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 OR4C15Q8NGM1 316 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 OR5R1Q8NH85 324 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 PRSS3P2Q8NHM4 247 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 RNF138Q8WVD3 245 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 SMPDL3BQ92485 455 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 FAM162AQ96A26 154 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 MIB2Q96AX9 1013 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 ORAI1Q96D31 301 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 MALSU1Q96EH3 234 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF583Q96ND8 569 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 STACQ99469 402 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 DDOQ99489 341 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 FAM173AQ9BQD7 235 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 TBL1XR1Q9BZK7 514 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF350Q9GZX5 532 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 RIBC2Q9H4K1 309 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 DUSP21Q9H596 190 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 NMNAT1Q9HAN9 279 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 SIRT7Q9NRC8 400 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 RBFOX1Q9NWB1 397 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 SCN3BQ9NY72 215 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 OR6C3Q9NZP0 311 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 KLF13Q9Y2Y9 288 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 MRPS18CQ9Y3D5 142 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 WDR45Q9Y484 360 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 WIF1Q9Y5W5 379 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 FREM1Q5H8C1 2179 aa4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 INTS1Q8N201 2190 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-203ENST00000460928 AKAP6Q13023 2319 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 CACNA1CQ13936 2221 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 TRAV34A0A0B4J273 112 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 IQCMA0A1B0GVH7 501 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 PRORSD1PA6NEY8 169 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 SERINC4A6NH21 518 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 FAM74A7A6NL05 159 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 C5orf58C9J3I9 102 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 E9PI62 339 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 KLRC4-KLRK1H3BQV0 150 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 H7C417 338 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 PLPP2O43688 288 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 AIREO43918 545 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 TPST2O60704 377 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 HPGDSO60760 199 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 ATG12O94817 140 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 NXPH2O95156 264 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 LGI1O95970 557 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 CSTAP01040 98 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 LDLRP01130 860 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 APOC3P02656 99 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 HTR1AP08908 422 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 NMBP08949 121 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 IFI6P09912 130 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 THRBP10828 461 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 VPREB1P12018 145 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 NPR2P20594 1047 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 DTYMKP23919 212 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 STOMP27105 288 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 DPP4P27487 766 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 PSMB6P28072 239 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 ARR3P36575 388 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 ACAA2P42765 397 aaKnown RBP4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 ALDH3B1P43353 468 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 NPY4RP50391 375 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 PRKXP51817 358 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 CLDN15P56746 228 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 SELENOVP59797 346 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 GMFBP60983 142 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 RBX1P62877 108 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 TLE4Q04727 773 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 EMX1Q04741 257 aaPredicted RBP4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 SKP2Q13309 424 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF141Q15928 474 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 FAM74A3Q4VXF1 159 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 COQ5Q5HYK3 327 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 C10orf91Q5T1B1 145 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 MRPL2Q5T653 305 aaKnown RBP4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 LCN1P1Q5VSP4 162 aa4.16□□□□□ -1.74
ATPAF1-203ENST00000460928 TMEM236Q5W0B7 351 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms