RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ZNF407Q9C0G0 2248 aa12.25□□□□□ -0.45
ERCC3-205ENST00000460485 ANKRD17O75179 2603 aaKnown RBP12.24□□□□□ -0.45
ERCC3-205ENST00000460485 OR14I1A6ND48 311 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 MEIS3P1A6NDR6 274 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 E9PLN8 166 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 AQP7O14520 342 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 CEACAM4O75871 244 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 OR4E1P0C645 316 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 AGTR1P30556 359 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 OR3A2P47893 321 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 FAM3AP98173 230 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 TGFBR3Q03167 851 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 FGL1Q08830 312 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 ARFRP1Q13795 201 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 ITPR2Q14571 2701 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 RSU1Q15404 277 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 TGIF1Q15583 401 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 FBXW9Q5XUX1 488 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 SLC25A42Q86VD7 318 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 HOGA1Q86XE5 327 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 TMEM104Q8NE00 496 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 BEST4Q8NFU0 473 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 OR4D10Q8NGI6 311 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 OR5L1Q8NGL2 311 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 OR4K15Q8NH41 348 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 ST8SIA4Q92187 359 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 ZNF775Q96BV0 537 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-205ENST00000460485 SEC22CQ9BRL7 303 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 SOX7Q9BT81 388 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 TINAGL1Q9GZM7 467 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-205ENST00000460485 POFUT1Q9H488 388 aa12.24□□□□□ -0.45
ERCC3-205ENST00000460485 NOP16Q9Y3C1 178 aaKnown RBP12.24□□□□□ -0.45
ERCC3-205ENST00000460485 HMSDA8MTL9 139 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 F5H5P2 479 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 IL2RAP01589 272 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 TPOP07202 933 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 VSIG10L2P0DP72 767 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 GNB3P16520 340 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 DTYMKP23919 212 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 RFC3P40938 356 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 IKZF1Q13422 519 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 IGFBP7Q16270 282 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 ATPAF1Q5TC12 328 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-205ENST00000460485 OR2A2Q6IF42 318 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 LIN54Q6MZP7 749 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 NLRC3Q7RTR2 1065 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 NUFIP2Q7Z417 695 aaKnown RBP12.23□□□□□ -0.45
ERCC3-205ENST00000460485 C12orf45Q8N5I9 185 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-205ENST00000460485 OR5H2Q8NGV7 314 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 NUDCD2Q8WVJ2 157 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 DVL3Q92997 716 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-205ENST00000460485 SARAFQ96BY9 339 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 BOD1Q96IK1 185 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 NICN1Q9BSH3 213 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 CLEC4MQ9H2X3 399 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-205ENST00000460485 RHOFQ9HBH0 211 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 KCNK7Q9Y2U2 307 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 DOPEY1Q5JWR5 2465 aa12.23□□□□□ -0.45
ERCC3-205ENST00000460485 UTP20O75691 2785 aaKnown RBP12.23□□□□□ -0.45
ERCC3-205ENST00000460485 A0A0A6YYD4 124 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 WIPF3A6NGB9 483 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 M0QYG6 137 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 SSX5O60225 188 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 CST4P01036 141 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 TMEM225BP0DP42 221 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 HLA-GP17693 338 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 SERPINA2P20848 420 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 ACKR3P25106 362 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 BLVRBP30043 206 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-205ENST00000460485 HRH1P35367 487 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 APLNRP35414 380 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 HGFACQ04756 655 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 SRSF4Q08170 494 aaKnown RBP12.22□□□□□ -0.45
ERCC3-205ENST00000460485 MRPL49Q13405 166 aaKnown RBP12.22□□□□□ -0.45
ERCC3-205ENST00000460485 GRK1Q15835 563 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 PLAC9Q5JTB6 97 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 LAMTOR1Q6IAA8 161 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 C11orf88Q6PI97 169 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 CRIP3Q6Q6R5 217 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 P4HA3Q7Z4N8 544 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 LYG2Q86SG7 212 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 UXS1Q8NBZ7 420 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 OR1K1Q8NGR3 316 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 OR13C8Q8NGS7 320 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 ARHGAP5-AS1Q96IT6 56 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 SPACA5Q96QH8 159 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 NKX3-1Q99801 234 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-205ENST00000460485 SLC6A7Q99884 636 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 DHRS9Q9BPW9 319 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 REPIN1Q9BWE0 567 aaKnown RBP12.22□□□□□ -0.45
ERCC3-205ENST00000460485 PECRQ9BY49 303 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 BEX1Q9HBH7 125 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 GPR173Q9NS66 373 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 MYEF2Q9P2K5 600 aaKnown RBP12.22□□□□□ -0.45
ERCC3-205ENST00000460485 CLCF1Q9UBD9 225 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 OPN4Q9UHM6 478 aa12.22□□□□□ -0.45
ERCC3-205ENST00000460485 FREM1Q5H8C1 2179 aa12.21□□□□□ -0.45
ERCC3-205ENST00000460485 A0A0B4J2A0 478 aa12.21□□□□□ -0.45
ERCC3-205ENST00000460485 TUBAL3A6NHL2 446 aa12.21□□□□□ -0.45
ERCC3-205ENST00000460485 A6NL46 340 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms