RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 CLVS1Q8IUQ0 354 aaPredicted RBP7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 JAGN1Q8N5M9 183 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 OR5T2Q8NGG2 359 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 OR10K1Q8NGX5 313 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 AQP3Q92482 292 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 GFI1Q99684 422 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 FAM192AQ9GZU8 254 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 WDR13Q9H1Z4 485 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 FN3KRPQ9HA64 309 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 ELL3Q9HB65 397 aaPredicted RBP7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 TMEM138Q9NPI0 162 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 SNTG1Q9NSN8 517 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 FBXO9Q9UK97 447 aaPredicted RBP7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 ING4Q9UNL4 249 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 FOXJ3Q9UPW0 622 aa7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 NOP16Q9Y3C1 178 aaKnown RBP7.31□□□□□ -1.24
CLTCL1-204ENST00000458188 DNHD1Q96M86 4753 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 IGHV4-30-2A0A087WSY4 118 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 ISPDA4D126 451 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 LRP5LA4QPB2 252 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 TRIM64BA6NI03 449 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 TMEM210A6NLX4 147 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 TMEM178BH3BS89 294 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 RP2O75695 350 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 ARL6IP5O75915 188 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 IRF2P14316 349 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 FSTP19883 344 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 BCL3P20749 454 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 SDC2P34741 201 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 GATA4P43694 442 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 NPBWR2P48146 333 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 CLDN12P56749 244 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 MZT1Q08AG7 82 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 PDZK1IP1Q13113 114 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 PDCD1Q15116 288 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 P2RY14Q15391 338 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 FAM76BQ5HYJ3 339 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 Q5PR19 223 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 HES5Q5TA89 166 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 SLC16A12Q6ZSM3 486 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 LHFPL2Q6ZUX7 228 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 NR2C2APQ86WQ0 139 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 ZNF573Q86YE8 665 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 GCSAMQ8N6F7 178 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 CELF2-AS1Q8N7Q2 184 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 MAPK1IP1LQ8NDC0 245 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 WFDC11Q8NEX6 87 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 OR4D6Q8NGJ1 314 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 OR11L1Q8NGX0 322 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 OR51F2Q8NH61 342 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 TNFAIP8L1Q8WVP5 186 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 NINJ1Q92982 152 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 SPSB1Q96BD6 273 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 MBD6Q96DN6 1003 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 SLITRK2Q9H156 845 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 KCNK15Q9H427 330 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 CNTD2Q9H8S5 307 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 ABCB9Q9NP78 766 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 MTCH1Q9NZJ7 389 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 RNF7Q9UBF6 113 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 IL36RNQ9UBH0 155 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 GSTK1Q9Y2Q3 226 aa7.3□□□□□ -1.24
CLTCL1-204ENST00000458188 AKAP6Q13023 2319 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 RAI1Q7Z5J4 1906 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 A0A0B4J203 849 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 A0A1W2PP11 408 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 CCDC160A6NGH7 325 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 J3QT63 122 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 ALX3O95076 343 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 PTBP3O95758 552 aaKnown RBP7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 ALDOBP05062 364 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 SFTPBP07988 381 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 SLC2A2P11168 524 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 PAX1P15863 534 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 MYL9P24844 172 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 DUSP1P28562 367 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 FGF9P31371 208 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 CEBPDP49716 269 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 PDLIM4P50479 330 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 ZP1P60852 638 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 OR10K2Q6IF99 312 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 CLEC2AQ6UVW9 174 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 GLIPR1L1Q6UWM5 242 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 ANKRD13BQ86YJ7 626 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 KRTAP1-3Q8IUG1 177 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 ZNF671Q8TAW3 534 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 C10orf105Q8TEF2 133 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 FAM168AQ92567 244 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 ITFG2Q969R8 447 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 Q96MF0 132 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 KCTD7Q96MP8 289 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 TECTBQ96PL2 329 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 GAL3ST1Q99999 423 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 BPESC1Q9GZL8 116 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 TLNRD1Q9H1K6 362 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 CHODLQ9H9P2 273 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 BARX1Q9HBU1 254 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 DLL4Q9NR61 685 aa7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 RBFOX1Q9NWB1 397 aaKnown RBP7.29□□□□□ -1.24
CLTCL1-204ENST00000458188 WIPI2Q9Y4P8 454 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms