RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MUC20Q8N307 709 aaPredicted RBP17.55■□□□□ 0.4
SNX27-204ENST00000458013 CLEC1BQ9P126 229 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 UFC1Q9Y3C8 167 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 SSC5DA1L4H1 1573 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 SRFP11831 508 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 CD96P40200 585 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 KISS1Q15726 138 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 ZNF683Q8IZ20 524 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 BCL2L2Q92843 193 aaPredicted RBP17.55■□□□□ 0.4
SNX27-204ENST00000458013 C3orf85A0A1B0GTC6 90 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 IGLV3-25P01717 112 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 CCR5P51681 352 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 PAX5Q02548 391 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 OR5C1Q8NGR4 320 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 ZG16BQ96DA0 208 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 AAMDCQ9H7C9 122 aa17.55■□□□□ 0.4
SNX27-204ENST00000458013 ARID1BQ8NFD5 2236 aaPredicted RBP17.55■□□□□ 0.4
SNX27-204ENST00000458013 MASP2O00187 686 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 CRYBA1P05813 215 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 FKBP2P26885 142 aaKnown RBP17.54■□□□□ 0.4
SNX27-204ENST00000458013 DOK1Q99704 481 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 EVPLQ92817 2033 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 OR5AL1P0C617 328 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 SNRPGP15A8MWD9 76 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 OR5AC1P0C628 307 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 CAMPP49913 170 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 SMAD4Q13485 552 aaKnown RBP17.54■□□□□ 0.4
SNX27-204ENST00000458013 PMS2P11Q13670 270 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 CTF1Q16619 201 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 FNDC7Q5VTL7 733 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 NHLRC2Q8NBF2 726 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 MAFAQ8NHW3 353 aaPredicted RBP17.54■□□□□ 0.4
SNX27-204ENST00000458013 COL16A1Q07092 1604 aaPredicted RBP17.54■□□□□ 0.4
SNX27-204ENST00000458013 M0QZ24 198 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 ZNF737O75373 536 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 CALCRP30988 508 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 SLC38A11Q08AI6 406 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 RAB32Q13637 225 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 ANKRD37Q7Z713 158 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 DUSP18Q8NEJ0 188 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 SLC2A9Q9NRM0 540 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 FAM24BQ8N5W8 94 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 OR5D13Q8NGL4 314 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 RNF2Q99496 336 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 ZNF385DQ9H6B1 395 aa17.54■□□□□ 0.4
SNX27-204ENST00000458013 DNASE2O00115 360 aaPredicted RBP17.53■□□□□ 0.4
SNX27-204ENST00000458013 TCL1AP56279 114 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 ZNF561Q8N587 486 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 OR2M5A3KFT3 312 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 TMEM97Q5BJF2 176 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 TMEM128Q5BJH2 165 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 TOLLIPQ9H0E2 274 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 TAAR3PQ9P1P4 343 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 LAMB1P07942 1786 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 IGHV3-21A0A0B4J1V1 117 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 ZNF628Q5EBL2 1059 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 CXorf58Q96LI9 332 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 DUSP21Q9H596 190 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 MTCH2Q9Y6C9 303 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 NUDT19A8MXV4 375 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 CEBPDP49716 269 aaPredicted RBP17.53■□□□□ 0.4
SNX27-204ENST00000458013 PJVKQ0ZLH3 352 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 FAM78BQ5VT40 261 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 LRRC29Q8WV35 223 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 TAAR9Q96RI9 348 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 TMEM147Q9BVK8 224 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 CNTD2Q9H8S5 307 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 SLX4Q8IY92 1834 aa17.53■□□□□ 0.4
SNX27-204ENST00000458013 MVDP53602 400 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 RGP1Q92546 391 aaPredicted RBP17.52■□□□□ 0.4
SNX27-204ENST00000458013 APOBEC3DQ96AK3 386 aaPredicted RBP17.52■□□□□ 0.4
SNX27-204ENST00000458013 GEMIN2O14893 280 aaKnown RBP17.52■□□□□ 0.4
SNX27-204ENST00000458013 HSBP1O75506 76 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 LIMS3P0CW19 117 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 LIMS4P0CW20 117 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 SPP1P10451 314 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 OR2W3Q7Z3T1 314 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 DYRK2Q92630 601 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 RPEQ96AT9 228 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 BCL2L10Q9HD36 194 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 TRAV1-2A0A0B4J238 106 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 C9orf170A2RU37 121 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 KCNAB3O43448 404 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 GNG4P50150 75 aa17.52■□□□□ 0.4
SNX27-204ENST00000458013 MRPL58Q14197 206 aaKnown RBP17.52■□□□□ 0.4
SNX27-204ENST00000458013 TOMM34Q15785 309 aaPredicted RBP17.52■□□□□ 0.4
SNX27-204ENST00000458013 CYC1P08574 325 aa17.52■□□□□ 0.39
SNX27-204ENST00000458013 NOVA1P51513 510 aaKnown RBP17.52■□□□□ 0.39
SNX27-204ENST00000458013 DYNLT3P51808 116 aa17.52■□□□□ 0.39
SNX27-204ENST00000458013 ZNF788Q6ZQV5 615 aa17.52■□□□□ 0.39
SNX27-204ENST00000458013 TSPAN12O95859 305 aa17.52■□□□□ 0.39
SNX27-204ENST00000458013 ACTL6AO96019 429 aa17.52■□□□□ 0.39
SNX27-204ENST00000458013 RPL7P18124 248 aaKnown RBP17.52■□□□□ 0.39
SNX27-204ENST00000458013 PABPC1L2AQ5JQF8 200 aa17.52■□□□□ 0.39
SNX27-204ENST00000458013 SMIM4Q8WVI0 70 aa17.52■□□□□ 0.39
SNX27-204ENST00000458013 TTC9Q92623 222 aa17.52■□□□□ 0.39
SNX27-204ENST00000458013 CACNG5Q9UF02 275 aa17.52■□□□□ 0.39
SNX27-204ENST00000458013 FPR2P25090 351 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 MICBQ29980 383 aa17.51■□□□□ 0.39
SNX27-204ENST00000458013 RPEL1Q2QD12 228 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms