RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 MMP17Q9ULZ9 603 aa3.21□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZCCHC11Q5TAX3 1644 aaKnown RBP3.21□□□□□ -1.9
HMGB3P30-201ENST00000457863 SOGA1O94964 1423 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 YTHDC2Q9H6S0 1430 aaKnown RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 DENND4AQ7Z401 1863 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 UQCRHLA0A096LP55 91 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 LOC100131303A0A0U1RQF7 123 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 C9orf170A2RU37 121 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 TMEM150BA6NC51 233 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 EVPLLA8MZ36 301 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 MANBAO00462 879 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 TNFRSF13BO14836 293 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 SERPINB7O75635 380 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC2A10O95528 541 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 RENP00797 406 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 UQCRHP07919 91 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 MRPL3P09001 348 aaKnown RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 FRMD6-AS1P0C7T7 363 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 PGA4P0DJD7 388 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 PGA3P0DJD8 388 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 PGA5P0DJD9 388 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 ESDP10768 282 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 CD99P14209 185 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 BCL3P20749 454 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 NR4A2P43354 598 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF133P52736 654 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 APOC4P55056 127 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 TAS2R43P59537 309 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 RHOBP62745 196 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 GPR18Q14330 331 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 IHHQ14623 411 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF630Q2M218 657 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 LINC00242Q5T6M2 205 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 C9orf64Q5T6V5 341 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 TMEM78Q5T7P6 136 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 OR10K2Q6IF99 312 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 TOMM20LQ6UXN7 152 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 LRRC28Q86X40 367 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 RAB43Q86YS6 212 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 C1orf158Q8N1D5 194 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF614Q8N883 585 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 GRPEL2Q8TAA5 225 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 SSC4DQ8WTU2 575 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 PCNPQ8WW12 178 aaKnown RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 DNAJC9Q8WXX5 260 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 RGP1Q92546 391 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 FRAT1Q92837 279 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 GHSRQ92847 366 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC25A38Q96DW6 304 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 TMEM80Q96HE8 168 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 TCEAL7Q9BRU2 100 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC25A33Q9BSK2 321 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 GGACTQ9BVM4 153 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 FAM96AQ9H5X1 160 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 FKRPQ9H9S5 495 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 RIMS3Q9UJD0 308 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 RAB22AQ9UL26 194 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 PPP2R2CQ9Y2T4 447 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 UTP11Q9Y3A2 253 aaKnown RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 MYH2Q9UKX2 1941 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 MTCL1Q9Y4B5 1905 aaKnown RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 RALGAPA1Q6GYQ0 2036 aa3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 EIF4G3O43432 1585 aaKnown RBP3.2□□□□□ -1.9
HMGB3P30-201ENST00000457863 FAM135BQ49AJ0 1406 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 SMG6Q86US8 1419 aaKnown RBP3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 VPS8Q8N3P4 1428 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 ERBINQ96RT1 1412 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 IGKV1D-8A0A087WSZ0 117 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 SMIM35A0A1B0GVV1 85 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 FAM25AB3EWG3 89 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 FAM25CB3EWG5 89 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 FAM25GB3EWG6 89 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 B4DXG7 233 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 TRIM49D1C9J1S8 452 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 C5orf58C9J3I9 102 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF587BE7ETH6 402 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 NPIPB9F8W1W9 429 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 M0QYV0 167 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC17A3O00476 420 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 CDX4O14627 284 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 TNFSF12O43508 249 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 NTN1O95631 604 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC25A27O95847 323 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 NUDT14O95848 222 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 PDYNP01213 254 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 BPGMP07738 259 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 OR9G9P0C7N8 305 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 SULT1A3P0DMM9 295 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 SULT1A4P0DMN0 295 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC2A2P11168 524 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 PSG1P11464 419 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 HLA-DOBP13765 273 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 GNB3P16520 340 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 TSPOP30536 169 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 S100A7P31151 101 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 CDKN2BP42772 138 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 OR1E2P47887 323 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 GZMMP51124 257 aa3.19□□□□□ -1.9
HMGB3P30-201ENST00000457863 RIPPLY3P57055 190 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms