RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ZNF429Q86V71 674 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 TSLPQ969D9 159 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 TOMM40LQ969M1 308 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 ADIPOR1Q96A54 375 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 MVB12AQ96EY5 273 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 URM1Q9BTM9 101 aaKnown RBP9.05□□□□□ -0.96
CLIP4-208ENST00000456385 BCO1Q9HAY6 547 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 CRLF2Q9HC73 371 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 SUSD2Q9UGT4 822 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 PADI1Q9ULC6 663 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 KCNIP3Q9Y2W7 256 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 TMED3Q9Y3Q3 217 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 LTBP2Q14767 1821 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 NSG1A0A0A6YYJ2 146 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 C5orf63A6NC05 138 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 FTCDNL1E5RQL4 147 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 E9PLN8 166 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 IL2RGP31785 369 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 CDAP32320 146 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 NOVA1P51513 510 aaKnown RBP9.04□□□□□ -0.96
CLIP4-208ENST00000456385 CASP6P55212 293 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 HSD17B7P56937 341 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 FAM89BQ8N5H3 189 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 OR8B12Q8NGG6 310 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 CA5BP1Q8WTZ4 195 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 POM121Q96HA1 1249 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 LURAP1Q96LR2 239 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 PACRGQ96M98 296 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-208ENST00000456385 PLA2G2FQ9BZM2 168 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 CA14Q9ULX7 337 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 TRANK1O15050 2925 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 FRG2CA6NGY1 282 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 FOXI3A8MTJ6 420 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-208ENST00000456385 MSTNO14793 375 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 APODP05090 189 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 SRP19P09132 144 aaKnown RBP9.04□□□□□ -0.96
CLIP4-208ENST00000456385 GIMD1P0DJR0 217 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 OR5H8P0DN80 308 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 RRADP55042 308 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF121P58317 390 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF385CQ66K41 422 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-208ENST00000456385 CYB5R2Q6BCY4 276 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 OGFOD3Q6PK18 319 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 DNM1P34Q6PK57 102 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 CRIP3Q6Q6R5 217 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 BEND4Q6ZU67 534 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 RNASE11Q8TAA1 199 aaKnown RBP9.04□□□□□ -0.96
CLIP4-208ENST00000456385 GPBAR1Q8TDU6 330 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 SLC46A1Q96NT5 459 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 VN1R1Q9GZP7 353 aa9.04□□□□□ -0.96
CLIP4-208ENST00000456385 F5P12259 2224 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 A0A087WWC5 75 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 A0A1B0GW64 132 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 ALG1L2C9J202 215 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 PHOX2AO14813 284 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 PTBP3O95758 552 aaKnown RBP9.03□□□□□ -0.96
CLIP4-208ENST00000456385 CTSDP07339 412 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-208ENST00000456385 COL9A1P20849 921 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 MDKP21741 143 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-208ENST00000456385 OMGP23515 440 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 SPCS3P61009 180 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 MFAP5Q13361 173 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 USF2Q15853 346 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-208ENST00000456385 PHLDA2Q53GA4 152 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 TMEM196Q5HYL7 178 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 RTL10Q7L3V2 364 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 LFNGQ8NES3 379 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 OR2G3Q8NGZ4 309 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 LIN37Q96GY3 246 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-208ENST00000456385 SNX22Q96L94 193 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 HIST1H2BLQ99880 126 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF700Q9H0M5 742 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF581Q9P0T4 197 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 LHFPL6Q9Y693 200 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 A6NIZ1 184 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 STMND1H3BQB6 276 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 RER1O15258 196 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 DBHP09172 617 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 GABRR1P24046 479 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 ATP6V0CP27449 155 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 KIR2DL1P43626 348 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-208ENST00000456385 GLIPR1P48060 266 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 CSNK1A1P48729 337 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 BIDP55957 195 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 RAP1BP61224 184 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 HSF1Q00613 529 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 C1orf61Q13536 156 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 TMEM187Q14656 261 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 KISS1Q15726 138 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 GPR157Q5UAW9 335 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 ARMC6Q6NXE6 501 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 FBXW12Q6X9E4 464 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 GRINAQ7Z429 371 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 P4HA3Q7Z4N8 544 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 C9orf40Q8IXQ3 194 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 NEU1Q99519 415 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 C2orf88Q9BSF0 95 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 SLC25A31Q9H0C2 315 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 DUSP15Q9H1R2 295 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-208ENST00000456385 UCK1Q9HA47 277 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms