RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SMIM19Q96E16 107 aa11.78□□□□□ -0.52
HDAC4-205ENST00000454542 PDCD1LG2Q9BQ51 273 aa11.78□□□□□ -0.52
HDAC4-205ENST00000454542 HES4Q9HCC6 221 aa11.78□□□□□ -0.52
HDAC4-205ENST00000454542 MXRA5Q9NR99 2828 aa11.78□□□□□ -0.52
HDAC4-205ENST00000454542 A0A1B0GW55 424 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 OGG1O15527 345 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 SYNGR1O43759 233 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 MT-ND2P03891 347 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 DUX4L2P0CJ85 424 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 DUX4L3P0CJ86 424 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 DUX4L4P0CJ87 422 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 DUX4L5P0CJ88 424 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 DUX4L6P0CJ89 424 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 DUX4L7P0CJ90 424 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 HSPA13P48723 471 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 ERVK11-1P61568 191 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 PAX8Q06710 450 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 IL24Q13007 206 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 MED21Q13503 144 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 DOC2BQ14184 412 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 C6orf141Q5SZD1 244 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 RNLSQ5VYX0 342 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 CRIP3Q6Q6R5 217 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 DUX4L9Q6RFH8 374 aaPredicted RBP11.77□□□□□ -0.53
HDAC4-205ENST00000454542 TMPRSS11AQ6ZMR5 421 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 ZNF788Q6ZQV5 615 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 AHSA2Q719I0 299 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 TEX29Q8N6K0 151 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 OR5AK2Q8NH90 309 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 ZNF671Q8TAW3 534 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 SPSB1Q96BD6 273 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 GAFA1Q96PS6 74 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 NRIP2Q9BQI9 281 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 COMMD4Q9H0A8 199 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 NLKQ9UBE8 527 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 DUX4Q9UBX2 424 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 SLC7A11Q9UPY5 501 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 POLDIP2Q9Y2S7 368 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 SIRT4Q9Y6E7 314 aaPredicted RBP11.77□□□□□ -0.53
HDAC4-205ENST00000454542 DOCK11Q5JSL3 2073 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 JMJD1CQ15652 2540 aa11.77□□□□□ -0.53
HDAC4-205ENST00000454542 ALX3O95076 343 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 PPIAL4GP0DN37 164 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 ATF1P18846 271 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 GLRA1P23415 457 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 AZGP1P25311 298 aaKnown RBP11.76□□□□□ -0.53
HDAC4-205ENST00000454542 C21orf33P30042 268 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-205ENST00000454542 FUT6P51993 359 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 SLC35A2P78381 396 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 TUSC1Q2TAM9 212 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 DMKNQ6E0U4 476 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-205ENST00000454542 ASPHD2Q6ICH7 369 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 ZNF529Q6P280 563 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 FAHD2BQ6P2I3 314 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-205ENST00000454542 ACP7Q6ZNF0 438 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 SLC36A1Q7Z2H8 476 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 PARP16Q8N5Y8 322 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 FAM216BQ8N7L0 139 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 BPIFB6Q8NFQ5 453 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 OR13C3Q8NGS6 347 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 TRMT10AQ8TBZ6 339 aaKnown RBP11.76□□□□□ -0.53
HDAC4-205ENST00000454542 RAB40AQ8WXH6 277 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 FGGYQ96C11 551 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 FAHD2AQ96GK7 314 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 PGLYRP3Q96LB9 341 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 PAK1IP1Q9NWT1 392 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-205ENST00000454542 BABAM2Q9NXR7 383 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 RASL12Q9NYN1 266 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 WNK2Q9Y3S1 2297 aa11.76□□□□□ -0.53
HDAC4-205ENST00000454542 IGKV1D-17A0A075B6S4 117 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 LOC105371242A0A075B767 164 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 TRBV2A0A0J9YWF9 115 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 KIR2DS1A0A191URI9 304 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 DVL1O14640 695 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 SIGLEC5O15389 551 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 TMPRSS2O15393 492 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 ENSAO43768 121 aaKnown RBP11.75□□□□□ -0.53
HDAC4-205ENST00000454542 SERPINA3P01011 423 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 CDK1P06493 297 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 PSG2P11465 335 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 ZNF20P17024 532 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 SMIM21Q3B7S5 101 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 LHFPL2Q6ZUX7 228 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 NPRL2Q8WTW4 380 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 TMIGD2Q96BF3 282 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 BORCS8Q96FH0 119 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 SDSLQ96GA7 329 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 ZNF488Q96MN9 340 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 OPALINQ96PE5 141 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 CCL13Q99616 98 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 DNAJB11Q9UBS4 358 aa11.75□□□□□ -0.53
HDAC4-205ENST00000454542 TRBV5-5A0A0J9YX44 114 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 FAM230AA0A1W2PPH8 454 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 NKX6-3A6NJ46 265 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 OR2AT4A6NND4 320 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 CD1AP06126 327 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 SELLP14151 372 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 PRKACBP22694 351 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 VHLP40337 213 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 RBP2P50120 134 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms