RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SYNGR1O43759 233 aa23.36■■□□□ 1.33
SMARCC1-203ENST00000454240 SOX2P48431 317 aa23.36■■□□□ 1.33
SMARCC1-203ENST00000454240 RBP2P50120 134 aa23.36■■□□□ 1.33
SMARCC1-203ENST00000454240 OR13C9Q8NGT0 318 aa23.36■■□□□ 1.33
SMARCC1-203ENST00000454240 C12orf43Q96C57 262 aaKnown RBP23.36■■□□□ 1.33
SMARCC1-203ENST00000454240 NEIL1Q96FI4 390 aaPredicted RBP23.36■■□□□ 1.33
SMARCC1-203ENST00000454240 POLDIP2Q9Y2S7 368 aa23.36■■□□□ 1.33
SMARCC1-203ENST00000454240 PNMA8CA0A1B0GUJ8 204 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 NOS1APO75052 506 aaPredicted RBP23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 GYPAP02724 150 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 CD2P06729 351 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 ACAA1P09110 424 aaPredicted RBP23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 OCM2P0CE71 109 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 PGA5P0DJD9 388 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 EEF1B2P24534 225 aaKnown RBP23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 ZFP36P26651 326 aaKnown RBP23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 IL24Q13007 206 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 MED22Q15528 200 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 ASPHD2Q6ICH7 369 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 ZNF529Q6P280 563 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 POC1AQ8NBT0 407 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 OR13C5Q8NGS8 318 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 TMEM186Q96B77 213 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 OPALINQ96PE5 141 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 YTHDF1Q9BYJ9 559 aaKnown RBP23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 KCNS2Q9ULS6 477 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 LRCH1Q9Y2L9 728 aa23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 POLR3KQ9Y2Y1 108 aaPredicted RBP23.35■■□□□ 1.33
SMARCC1-203ENST00000454240 A8MXK9 166 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 INAFM1C9JVW0 142 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 FOXH1O75593 365 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 GLRA1P23415 457 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 ATP1B3P54709 279 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 GABARAPL2P60520 117 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 GMFBP60983 142 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 ZNF841Q6ZN19 808 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 LHFPL2Q6ZUX7 228 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 GLCCI1Q86VQ1 547 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 TMEM106AQ96A25 262 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 TMEM160Q9NX00 188 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 RASL12Q9NYN1 266 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 KAAG1Q9UBP8 84 aa23.34■■□□□ 1.33
SMARCC1-203ENST00000454240 TRAV20A0A0B4J274 112 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 SULT1B1O43704 296 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 MTCP1P56278 107 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 Q499Y3 187 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 ESCO2Q56NI9 601 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 STUMQ69YW2 141 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 NLRC3Q7RTR2 1065 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 OR8B3Q8NGG8 313 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 OR8B2Q96RD0 313 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 HIF1ANQ9NWT6 349 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 CTSZQ9UBR2 303 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 DNAJB11Q9UBS4 358 aa23.33■■□□□ 1.33
SMARCC1-203ENST00000454240 SVEP1Q4LDE5 3571 aa23.33■■□□□ 1.32
SMARCC1-203ENST00000454240 FN1P02751 2386 aaKnown RBP23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 KIAA1324LA8MWY0 1029 aaPredicted RBP23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 ADAM20O43506 726 aa23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 MRPS14O60783 128 aaKnown RBP23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 LCN2P80188 198 aa23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 ATPAF1Q5TC12 328 aaPredicted RBP23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 TMIGD2Q96BF3 282 aa23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 ZNF488Q96MN9 340 aa23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 NRIP2Q9BQI9 281 aa23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 SSBP3Q9BWW4 388 aaPredicted RBP23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 NEK6Q9HC98 313 aa23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 ISYNA1Q9NPH2 558 aa23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 NLKQ9UBE8 527 aa23.32■■□□□ 1.32
SMARCC1-203ENST00000454240 OCMP0CE72 109 aaPredicted RBP23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 AMY2BP19961 511 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 MAP2K4P45985 399 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 PITPNBP48739 271 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 ERVK11-1P61568 191 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 GPR50Q13585 617 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 TBCEQ15813 527 aaPredicted RBP23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 CRIP3Q6Q6R5 217 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 RNF144BQ7Z419 303 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 OR5T2Q8NGG2 359 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 HES4Q9HCC6 221 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 SNTG1Q9NSN8 517 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 TAS2R4Q9NYW5 299 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 MTCH1Q9NZJ7 389 aa23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 SONP18583 2426 aaKnown RBP23.31■■□□□ 1.32
SMARCC1-203ENST00000454240 PPIAL4CA0A0B4J2A2 164 aa23.3■■□□□ 1.32
SMARCC1-203ENST00000454240 PHF1O43189 567 aaPredicted RBP23.3■■□□□ 1.32
SMARCC1-203ENST00000454240 RAB3AP20336 220 aa23.3■■□□□ 1.32
SMARCC1-203ENST00000454240 GNB2P62879 340 aa23.3■■□□□ 1.32
SMARCC1-203ENST00000454240 WDR25Q64LD2 544 aaPredicted RBP23.3■■□□□ 1.32
SMARCC1-203ENST00000454240 ACP7Q6ZNF0 438 aa23.3■■□□□ 1.32
SMARCC1-203ENST00000454240 SLC25A26Q70HW3 274 aa23.3■■□□□ 1.32
SMARCC1-203ENST00000454240 ANGPTL6Q8NI99 470 aa23.3■■□□□ 1.32
SMARCC1-203ENST00000454240 SPACA5Q96QH8 159 aa23.3■■□□□ 1.32
SMARCC1-203ENST00000454240 DNTTIP1Q9H147 329 aa23.3■■□□□ 1.32
SMARCC1-203ENST00000454240 WNK2Q9Y3S1 2297 aa23.29■■□□□ 1.32
SMARCC1-203ENST00000454240 TRBV5-7A0A0A0MS05 114 aa23.29■■□□□ 1.32
SMARCC1-203ENST00000454240 OR2AT4A6NND4 320 aa23.29■■□□□ 1.32
SMARCC1-203ENST00000454240 TMPRSS2O15393 492 aa23.29■■□□□ 1.32
SMARCC1-203ENST00000454240 NPY4RP50391 375 aa23.29■■□□□ 1.32
SMARCC1-203ENST00000454240 TPBGQ13641 420 aa23.29■■□□□ 1.32
SMARCC1-203ENST00000454240 OR51A2Q8NGJ7 313 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms