RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 GPR173Q9NS66 373 aa10.23□□□□□ -0.77
CPSF4-208ENST00000452047 RASL12Q9NYN1 266 aa10.23□□□□□ -0.77
CPSF4-208ENST00000452047 WARS2Q9UGM6 360 aaKnown RBP10.23□□□□□ -0.77
CPSF4-208ENST00000452047 SNX5Q9Y5X3 404 aa10.23□□□□□ -0.77
CPSF4-208ENST00000452047 A0A1B0GUS0 222 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 PQLC2LA1A4F0 135 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 J3QT63 122 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 NOS1APO75052 506 aaPredicted RBP10.22□□□□□ -0.77
CPSF4-208ENST00000452047 APOL3O95236 402 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 OR2T7P0C7T2 308 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 NDUFB7P17568 137 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 MPZP25189 248 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 HAAOP46952 286 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 GABRA2P47869 451 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 GUCA2AQ02747 115 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 SMIM21Q3B7S5 101 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 ASRGL1Q7L266 308 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 CATSPERDQ86XM0 798 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 TMEM185AQ8NFB2 350 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 OR8J1Q8NGP2 316 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 OR2T27Q8NH04 317 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 OR4F5Q8NH21 305 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 TBC1D15Q8TC07 691 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 ZNF488Q96MN9 340 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 TBX5Q99593 518 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 RIBC2Q9H4K1 309 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 METTL8Q9H825 291 aaKnown RBP10.22□□□□□ -0.77
CPSF4-208ENST00000452047 ZNRD1Q9P1U0 126 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 SLC22A13Q9Y226 551 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 CMYA5Q8N3K9 4069 aa10.22□□□□□ -0.77
CPSF4-208ENST00000452047 TRBV23-1A0A0A0MS06 115 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 A0A1W2PQ09 198 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 A6NIN4 97 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 SAC3D1A6NKF1 404 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 RFPL4AA6NLU0 287 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 RFPL4AL1F8VTS6 287 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 NPFFO15130 113 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 GPR137BO60478 399 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 RPP14O95059 124 aaKnown RBP10.21□□□□□ -0.77
CPSF4-208ENST00000452047 KRT8P05787 483 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 CRYBA1P05813 215 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 FBP1P09467 338 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 ISL1P61371 349 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 TAF9Q16594 264 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 HCP5Q6MZN7 132 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 ZNF573Q86YE8 665 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 CALHM1Q8IU99 346 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 PNKDQ8N490 385 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 CD177Q8N6Q3 437 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 YIPF7Q8N8F6 280 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 RORBQ92753 470 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 EME1Q96AY2 570 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 RBM4BQ9BQ04 359 aaKnown RBP10.21□□□□□ -0.77
CPSF4-208ENST00000452047 NRIP2Q9BQI9 281 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 BEX1Q9HBH7 125 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 HES4Q9HCC6 221 aa10.21□□□□□ -0.77
CPSF4-208ENST00000452047 ANKRD61A6NGH8 418 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 METTL15A6NJ78 407 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 E9PQ18 207 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 CIB2O75838 187 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 SULT1C4O75897 302 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 KNG1P01042 644 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 ALPLP05186 524 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 EEF1B2P24534 225 aaKnown RBP10.2□□□□□ -0.78
CPSF4-208ENST00000452047 SAA4P35542 130 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 UBE2E1P51965 193 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 ERVK11-1P61568 191 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 TMED1Q13445 227 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 OLFML2AQ68BL7 652 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 NCR3LG1Q68D85 454 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 PRSS35Q8N3Z0 413 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 OR10H4Q8NGA5 316 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 DSCAML1Q8TD84 2053 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 PYDC1Q8WXC3 89 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 RNF166Q96A37 237 aaPredicted RBP10.2□□□□□ -0.78
CPSF4-208ENST00000452047 DPAGT1Q9H3H5 408 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 C19orf12Q9NSK7 152 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 POLDIP2Q9Y2S7 368 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 CAB39Q9Y376 341 aaPredicted RBP10.2□□□□□ -0.78
CPSF4-208ENST00000452047 FAM96BQ9Y3D0 163 aa10.2□□□□□ -0.78
CPSF4-208ENST00000452047 A0A1W2PRD5 423 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 A0A1W2PRF3 423 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 A0A1W2PRM7 423 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 CLPSL1A2RUU4 121 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 H3BNX3 289 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 NXPH2O95156 264 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 PRDX2P32119 198 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 CEBPDP49716 269 aaPredicted RBP10.19□□□□□ -0.78
CPSF4-208ENST00000452047 CDC42P60953 191 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 ZNF85Q03923 595 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 SRSF4Q08170 494 aaKnown RBP10.19□□□□□ -0.78
CPSF4-208ENST00000452047 ACSM1Q08AH1 577 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 IL24Q13007 206 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 UBE2V2Q15819 145 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 ODF4Q2M2E3 257 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 ANGPTL5Q86XS5 388 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 FAM185AQ8N0U4 392 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 ZNF561Q8N587 486 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 C11orf42Q8N5U0 333 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 LINC01006Q8NI28 216 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms