RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 IL24Q13007 206 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 DOC2BQ14184 412 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 MICBQ29980 383 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 CR1LQ2VPA4 569 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 SFRP4Q6FHJ7 346 aaPredicted RBP11.97□□□□□ -0.49
COL3A1-203ENST00000450867 HAGHLQ6PII5 290 aaPredicted RBP11.97□□□□□ -0.49
COL3A1-203ENST00000450867 NLRC3Q7RTR2 1065 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 CALHM1Q8IU99 346 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 POC1AQ8NBT0 407 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 C19orf18Q8NEA5 215 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 DEFB108BQ8NET1 73 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 OR8B3Q8NGG8 313 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 GPR148Q8TDV2 347 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 GATAD2BQ8WXI9 593 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 SPSB1Q96BD6 273 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 PGLYRP3Q96LB9 341 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 OR8B2Q96RD0 313 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 NRIP2Q9BQI9 281 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 RASL12Q9NYN1 266 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 CTSZQ9UBR2 303 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 ERGIC3Q9Y282 383 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 POLDIP2Q9Y2S7 368 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 DSCAML1Q8TD84 2053 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 TRBV5-5A0A0J9YX44 114 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 J3QLI3 93 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 AKR7A2O43488 359 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 DENRO43583 198 aaKnown RBP11.96□□□□□ -0.49
COL3A1-203ENST00000450867 PRKACBP22694 351 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 RBP2P50120 134 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 RBM48Q5RL73 367 aaKnown RBP11.96□□□□□ -0.49
COL3A1-203ENST00000450867 FAM120AOSQ5T036 256 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.49
COL3A1-203ENST00000450867 BOLLQ8N9W6 283 aaKnown RBP11.96□□□□□ -0.49
COL3A1-203ENST00000450867 SGCDQ92629 289 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 BORCS8Q96FH0 119 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 MND1Q9BWT6 205 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 SSBP3Q9BWW4 388 aaPredicted RBP11.96□□□□□ -0.49
COL3A1-203ENST00000450867 WDR13Q9H1Z4 485 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 RASSF4Q9H2L5 321 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 LPAR2Q9HBW0 351 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 HES4Q9HCC6 221 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 DHDHQ9UQ10 334 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 ZNF281Q9Y2X9 895 aa11.96□□□□□ -0.49
COL3A1-203ENST00000450867 ATRQ13535 2644 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 A0A0G2JMP0 313 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 A0A0X1KG70 313 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 PTGES3LE9PB15 166 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 TRAPPC2LH3BP13 241 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 SYNGR1O43759 233 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 FCN3O75636 299 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 AMY2BP19961 511 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 AZGP1P25311 298 aaKnown RBP11.95□□□□□ -0.5
COL3A1-203ENST00000450867 ATP1B3P54709 279 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 RPS11P62280 158 aaKnown RBP eCLIP11.95□□□□□ -0.5
COL3A1-203ENST00000450867 LCN2P80188 198 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 YIF1BQ5BJH7 314 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 ASPHD2Q6ICH7 369 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 CRIP3Q6Q6R5 217 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 ZNF788Q6ZQV5 615 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 LHFPL2Q6ZUX7 228 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 PRSS48Q7RTY5 328 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 SERPINA12Q8IW75 414 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 OR4M2Q8NGB6 313 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 OR5D14Q8NGL3 314 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 ANGPTL6Q8NI99 470 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 TRMT10AQ8TBZ6 339 aaKnown RBP11.95□□□□□ -0.5
COL3A1-203ENST00000450867 GHSRQ92847 366 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 SEH1LQ96EE3 360 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 POM121Q96HA1 1249 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 CNBD2Q96M20 576 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 OPALINQ96PE5 141 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 TMPRSS13Q9BYE2 586 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 Q9H521 79 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 ZCCHC4Q9H5U6 513 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 NLKQ9UBE8 527 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 CLN8Q9UBY8 286 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 ZNF222Q9UK12 451 aa11.95□□□□□ -0.5
COL3A1-203ENST00000450867 IGHV3OR15-7A0A075B7D8 119 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 FAM230AA0A1W2PPH8 454 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 PHF1O43189 567 aaPredicted RBP11.94□□□□□ -0.5
COL3A1-203ENST00000450867 ADAM20O43506 726 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 RGS10O43665 173 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 SULT1B1O43704 296 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 GPX5O75715 221 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 GYPAP02724 150 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 CD2P06729 351 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 HNF1AP20823 631 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 GLRA1P23415 457 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 GNB2P62879 340 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 SMIM21Q3B7S5 101 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 CHRFAM7AQ494W8 412 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 DCAF12L2Q5VW00 463 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 ACP7Q6ZNF0 438 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 ANGPTL5Q86XS5 388 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 OR13C9Q8NGT0 318 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 NPRL2Q8WTW4 380 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 TSEN15Q8WW01 171 aaKnown RBP11.94□□□□□ -0.5
COL3A1-203ENST00000450867 TMIGD2Q96BF3 282 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 SHARPINQ9H0F6 387 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 SEBOXQ9HB31 216 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms