RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 A0A0B4J2E0 115 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 A0A1B0GX12 115 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CEBPZOSA8MTT3 80 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 GP2P55259 537 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 MRPS34P82930 218 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 TNK1Q13470 666 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 RNFT1Q5M7Z0 435 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF620Q6ZNG0 422 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 PBDC1Q9BVG4 233 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 ATG5Q9H1Y0 275 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 UBQLN3Q9H347 655 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 GPR173Q9NS66 373 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 SULT1C2O00338 296 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CYTIPO60759 359 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CT45A6P0DMU7 189 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CT45A5P0DMU8 189 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CT45A7P0DMV0 189 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 GTF2F2P13984 249 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 WT1P19544 449 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CPT2P23786 658 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 ID1P41134 155 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 UCP2P55851 309 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CT45A1Q5HYN5 189 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 KIR3DL3Q8N743 410 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CT45A3Q8NHU0 189 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM203Q969S6 136 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC17A5Q9NRA2 495 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM38BQ9NVV0 291 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 LCTP09848 1927 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 SSX5O60225 188 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 SORBS2O94875 1100 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 TK1P04183 234 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CST2P09228 141 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 ANXA3P12429 323 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 GPM6AP51674 278 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 COLCA1Q6ZS62 124 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CCDC28AQ8IWP9 274 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 SSMEM1Q8WWF3 244 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 KCTD7Q96MP8 289 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF385AQ96PM9 386 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR2V2Q96R30 315 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 MMP26Q9NRE1 261 aa4.91□□□□□ -1.62
CDC42BPA-209ENST00000448940 CD300LBA8K4G0 201 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 OIP5O43482 229 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 PSPNO60542 156 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 SERPINE2P07093 398 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 IFI6P09912 130 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR2T7P0C7T2 308 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 CD80P33681 288 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 SDC2P34741 201 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 HTR2BP41595 481 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 ERHP84090 104 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC9A3R2Q15599 337 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 SCGB2B2Q4G0G5 96 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 CLVS2Q5SYC1 327 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 OGFRL1Q5TC84 451 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 TBPL2Q6SJ96 375 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 DGAT2L6Q6ZPD8 337 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 CEACAM19Q7Z692 300 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 TCTE3Q8IZS6 198 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 SPARTQ8N0X7 666 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR5T1Q8NG75 326 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 SCMH1Q96GD3 660 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 S100A14Q9HCY8 104 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 DEPPQ9NTK1 212 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 A4GNTQ9UNA3 340 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 AK6Q9Y3D8 172 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 A0A0G2JMM0 328 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 A0A1W2PPB8 328 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 A0A1W2PRS3 328 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR5B21A6NL26 309 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 KIR3DP1A8MWS1 328 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 PSMB10P40306 273 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC35A2P78381 396 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 EXOSC6Q5RKV6 272 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 RPL7L1Q6DKI1 246 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 DMRTC2Q8IXT2 367 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 S100A16Q96FQ6 103 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 RBM14Q96PK6 669 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLX1AQ9BQ83 275 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 YTHDF1Q9BYJ9 559 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 B9D1Q9UPM9 204 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 A0A1W2PS29 197 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 SDCBPO00560 298 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 UPK3AO75631 287 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 NR4A1P22736 598 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 LSM3P62310 102 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 MXD1Q05195 221 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 SPOCK1Q08629 439 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 RHEBQ15382 184 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 VMA21Q3ZAQ7 101 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 UBE2UQ5VVX9 321 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 TSEN54Q7Z6J9 526 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 LYG1Q8N1E2 194 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 INPP5EQ9NRR6 644 aa4.9□□□□□ -1.62
CDC42BPA-209ENST00000448940 TRBV4-1A0A0J9YWV2 114 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 A0A1B0GUS0 222 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 LOC100130705A0A1B0GUX0 176 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 A0A1W2PPK0 400 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 PLPP3O14495 311 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms