RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 TMIGD2Q96BF3 282 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 C12orf43Q96C57 262 aaKnown RBP11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 SHARPINQ9H0F6 387 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 DUSP21Q9H596 190 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 ZCCHC4Q9H5U6 513 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 TMEM160Q9NX00 188 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 CLN8Q9UBY8 286 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 OR5V1Q9UGF6 321 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 BOLA1Q9Y3E2 137 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 SIRT4Q9Y6E7 314 aaPredicted RBP11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 HIVEP2P31629 2446 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 A0A0G2JMP0 313 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 A0A0X1KG70 313 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 NKX6-3A6NJ46 265 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 MAGEB3O15480 346 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 PHF1O43189 567 aaPredicted RBP11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 DENRO43583 198 aaKnown RBP11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 CYB5AP00167 134 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 LALBAP00709 142 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 PLATP00750 562 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 AZGP1P25311 298 aaKnown RBP11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 NPY4RP50391 375 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 SPHARQ15513 63 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 MED22Q15528 200 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 CR1LQ2VPA4 569 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 YIF1BQ5BJH7 314 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 DCAF12L2Q5VW00 463 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 DMKNQ6E0U4 476 aaPredicted RBP11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 FAHD2BQ6P2I3 314 aaPredicted RBP11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 LYPD2Q6UXB3 125 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 SLC36A1Q7Z2H8 476 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 PARP16Q8N5Y8 322 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 POC1AQ8NBT0 407 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 ZNF485Q8NCK3 441 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 OR4M2Q8NGB6 313 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 RPS4Y2Q8TD47 263 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 FAHD2AQ96GK7 314 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 OPALINQ96PE5 141 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 BEX2Q9BXY8 128 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 PKIBQ9C010 78 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 WDR13Q9H1Z4 485 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 PAK1IP1Q9NWT1 392 aaPredicted RBP11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 RASL12Q9NYN1 266 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 NLKQ9UBE8 527 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 LPAR3Q9UBY5 353 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 CDC42EP3Q9UKI2 254 aa11.71□□□□□ -0.53
GTF3C3-206ENST00000448539 ZANQ9Y493 2812 aa11.71□□□□□ -0.54
GTF3C3-206ENST00000448539 IGKV1-9A0A0C4DH69 117 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 A8MXK9 166 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 TMPRSS2O15393 492 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 SYNGR1O43759 233 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 NXPH2O95156 264 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 MT-ND2P03891 347 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 HCKP08631 526 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 CELP19835 753 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 RAB3AP20336 220 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 GATA3P23771 443 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 ZFP36P26651 326 aaKnown RBP11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 MTCP1P56278 107 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 SEC61A1P61619 476 aaKnown RBP11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 PPP3R1P63098 170 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 BDH1Q02338 343 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 IL24Q13007 206 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 SMIM21Q3B7S5 101 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 CHRFAM7AQ494W8 412 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 PRSS48Q7RTY5 328 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 CALHM1Q8IU99 346 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 MKXQ8IYA7 352 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 OR5T2Q8NGG2 359 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 SGCDQ92629 289 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 TMEM106AQ96A25 262 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 SEH1LQ96EE3 360 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 SNTG1Q9NSN8 517 aa11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 YLPM1P49750 1951 aaKnown RBP11.7□□□□□ -0.54
GTF3C3-206ENST00000448539 NAV3Q8IVL0 2385 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 J3QLI3 93 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 SULT1B1O43704 296 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 CRLF1O75462 422 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 CD1AP06126 327 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 PGA5P0DJD9 388 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 MPZP25189 248 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 GABRA2P47869 451 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 POU3F4P49335 361 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 ACSM1Q08AH1 577 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 IRF3Q14653 427 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 Q499Y3 187 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 FAM120AOSQ5T036 256 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 WDR25Q64LD2 544 aaPredicted RBP11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 BTNL3Q6UXE8 466 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 SLC25A26Q70HW3 274 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 RGP1Q92546 391 aaPredicted RBP11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 CPNE2Q96FN4 548 aaPredicted RBP11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 MED30Q96HR3 178 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 PGLYRP3Q96LB9 341 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 CEP19Q96LK0 163 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 ZNF488Q96MN9 340 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 OR5M11Q96RB7 305 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 CCL13Q99616 98 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 KAAG1Q9UBP8 84 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms