RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 WBP4O75554 376 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 FADS2O95864 444 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 IGHA1P01876 353 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 HTR1AP08908 422 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 UBCP0CG48 685 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 GABRA2P47869 451 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 IL13RA1P78552 427 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 RAB40BQ12829 278 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 GALEQ14376 348 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 RCN1Q15293 331 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 SMN1Q16637 294 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 LRRC10Q5BKY1 277 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 TMEM244Q5VVB8 128 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 RBMS3Q6XE24 437 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 BRD3OSQ6XYD6 125 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 ACP7Q6ZNF0 438 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 C9orf139Q6ZV77 190 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 CALHM1Q8IU99 346 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 POC1AQ8NBT0 407 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 OR52I1Q8NGK6 324 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 TRMT10AQ8TBZ6 339 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 NPRL2Q8WTW4 380 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 FAM216AQ8WUB2 273 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 ZNF649Q9BS31 505 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 ISG20L2Q9H9L3 353 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 MRPS18AQ9NVS2 196 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 ERVK13-1Q9NX77 482 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 ZNF222Q9UK12 451 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 SLC7A11Q9UPY5 501 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 RPL36Q9Y3U8 105 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 MAB21L2Q9Y586 359 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 IGKV1-27A0A075B6S5 117 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 CENPVL3A0A0U1RRI6 287 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 FAM230AA0A1W2PPH8 454 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 NKX6-3A6NJ46 265 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 OR4C45A6NMZ5 311 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 SIGLEC5O15389 551 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 CLIC3O95833 236 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 ISG15P05161 165 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 PGA5P0DJD9 388 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 MPZP25189 248 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 CCR9P51686 369 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 ACTA2P62736 377 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 UBA52P62987 128 aaKnown RBP10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 ACTG2P63267 376 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 KLHL22Q53GT1 634 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 GPR157Q5UAW9 335 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 METTL11BQ5VVY1 283 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 BATF2Q8N1L9 274 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 CD177Q8N6Q3 437 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 ZNRF1Q8ND25 227 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 H1FXQ92522 213 aaKnown RBP10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 C10orf35Q96D05 121 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 ADAT3Q96EY9 351 aaPredicted RBP10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 MRPL48Q96GC5 212 aaKnown RBP10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 C1orf147Q96MC9 270 aaPredicted RBP10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 DCTN5Q9BTE1 182 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 ALG8Q9BVK2 526 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 CHST5Q9GZS9 411 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 SLC25A10Q9UBX3 287 aaPredicted RBP10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 POLDIP2Q9Y2S7 368 aa10.51□□□□□ -0.73
PRPF40A-203ENST00000448428 RFPL4AA6NLU0 287 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 E9PI62 339 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 RFPL4AL1F8VTS6 287 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 GATBO75879 557 aaKnown RBP10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 SERPINA3P01011 423 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 NDUFB7P17568 137 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 PEX2P28328 305 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 PRDX2P32119 198 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 FUT6P51993 359 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 CAV3P56539 151 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 BPIFB3P59826 476 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 ERVK11-1P61568 191 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 ADARB1P78563 741 aaKnown RBP10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 IL24Q13007 206 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 BAMBIQ13145 260 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 ALKBH1Q13686 389 aaKnown RBP10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 SMIM21Q3B7S5 101 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 ZNF691Q5VV52 312 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 RUSC1-AS1Q66K80 236 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 EGFL6Q8IUX8 553 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 SYS1Q8N2H4 156 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 PACRGLQ8N7B6 248 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 OR10AC1Q8NH08 325 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 C8orf46Q8TAG6 207 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 CNIH3Q8TBE1 160 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 CYGBQ8WWM9 190 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 PP6455Q8WZ26 134 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 FGGYQ96C11 551 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 SDSLQ96GA7 329 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 DMRTB1Q96MA1 342 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 DUX5Q96PT3 197 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 MYCBPQ99417 103 aaPredicted RBP10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 NRIP2Q9BQI9 281 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 PKIBQ9C010 78 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 HES4Q9HCC6 221 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 FGF20Q9NP95 211 aaPredicted RBP10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 C8orf4Q9NR00 106 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 INPP5EQ9NRR6 644 aa10.5□□□□□ -0.73
PRPF40A-203ENST00000448428 ONECUT1Q9UBC0 465 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms