RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 A0A1B0GW55 424 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 H3BSH0 61 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 TRIM77I1YAP6 450 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 SIGLEC5O15389 551 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 WBP4O75554 376 aaKnown RBP15.41■□□□□ 0.06
CCDC188-202ENST00000444532 TOX4O94842 621 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 RPSAP08865 295 aaKnown RBP15.41■□□□□ 0.06
CCDC188-202ENST00000444532 DUX4L2P0CJ85 424 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 DUX4L3P0CJ86 424 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 DUX4L4P0CJ87 422 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 DUX4L5P0CJ88 424 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 DUX4L6P0CJ89 424 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 DUX4L7P0CJ90 424 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 PGA5P0DJD9 388 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 IGHV4-38-2P0DP08 117 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 PSG2P11465 335 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 PEX2P28328 305 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 FUT6P51993 359 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 NANOS3P60323 173 aaKnown RBP15.41■□□□□ 0.06
CCDC188-202ENST00000444532 MRPL28Q13084 256 aaKnown RBP15.41■□□□□ 0.06
CCDC188-202ENST00000444532 IKZF1Q13422 519 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 UBE2V2Q15819 145 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 SMIM21Q3B7S5 101 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 METTL11BQ5VVY1 283 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 DUX4L9Q6RFH8 374 aaPredicted RBP15.41■□□□□ 0.06
CCDC188-202ENST00000444532 RBMS3Q6XE24 437 aaKnown RBP15.41■□□□□ 0.06
CCDC188-202ENST00000444532 ACP7Q6ZNF0 438 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 C9orf139Q6ZV77 190 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 DHRSXQ8N5I4 330 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 LY6G5BQ8NDX9 201 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 CYGBQ8WWM9 190 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 WDFY2Q96P53 400 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 GAFA1Q96PS6 74 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 ZNF649Q9BS31 505 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 PKIBQ9C010 78 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 DUX4Q9UBX2 424 aa15.41■□□□□ 0.06
CCDC188-202ENST00000444532 IGKV1D-17A0A075B6S4 117 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 FAM230AA0A1W2PPH8 454 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 SYNGR1O43759 233 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 MMP9P14780 707 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 GABRA2P47869 451 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 CAV3P56539 151 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 ADARB1P78563 741 aaKnown RBP15.4■□□□□ 0.06
CCDC188-202ENST00000444532 IL24Q13007 206 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 ALKBH1Q13686 389 aaKnown RBP15.4■□□□□ 0.06
CCDC188-202ENST00000444532 FGFRL1Q8N441 504 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 SETD9Q8NE22 299 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 TRMT10AQ8TBZ6 339 aaKnown RBP15.4■□□□□ 0.06
CCDC188-202ENST00000444532 HAVCR2Q8TDQ0 301 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 PCGF1Q9BSM1 259 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 DCTN5Q9BTE1 182 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 JAM3Q9BX67 310 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 FGF20Q9NP95 211 aaPredicted RBP15.4■□□□□ 0.06
CCDC188-202ENST00000444532 SLC25A10Q9UBX3 287 aaPredicted RBP15.4■□□□□ 0.06
CCDC188-202ENST00000444532 ZNF222Q9UK12 451 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 HHLA2Q9UM44 414 aa15.4■□□□□ 0.06
CCDC188-202ENST00000444532 TRAV40A0A0B4J280 105 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 IRGMA1A4Y4 181 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 OR4C45A6NMZ5 311 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 CASQ2O14958 399 aaPredicted RBP15.39■□□□□ 0.05
CCDC188-202ENST00000444532 ARF6P62330 175 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 IL18R1Q13478 541 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 PDCD1Q15116 288 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 CNN3Q15417 329 aaKnown RBP15.39■□□□□ 0.05
CCDC188-202ENST00000444532 SMN1Q16637 294 aaKnown RBP15.39■□□□□ 0.05
CCDC188-202ENST00000444532 DGUOKQ16854 277 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 OGFRL1Q5TC84 451 aaPredicted RBP15.39■□□□□ 0.05
CCDC188-202ENST00000444532 GPR157Q5UAW9 335 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 ANGPTL5Q86XS5 388 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 CALHM1Q8IU99 346 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 BCL6BQ8N143 479 aaPredicted RBP15.39■□□□□ 0.05
CCDC188-202ENST00000444532 SIGLECL1Q8N7X8 197 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 DNAAF1Q8NEP3 725 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 C8orf46Q8TAG6 207 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 FAM216AQ8WUB2 273 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 SDSLQ96GA7 329 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 NRIP2Q9BQI9 281 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 SIRPDQ9H106 197 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 DCLRE1BQ9H816 532 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 ISG20L2Q9H9L3 353 aaKnown RBP15.39■□□□□ 0.05
CCDC188-202ENST00000444532 KPTNQ9Y664 436 aa15.39■□□□□ 0.05
CCDC188-202ENST00000444532 IGHV3OR16-10A0A075B7F0 116 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 NXPH2O95156 264 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 CLIC3O95833 236 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 SFTPBP07988 381 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 SELLP14151 372 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 ZNF20P17024 532 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 DCKP27707 260 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 GBX2P52951 348 aaPredicted RBP15.38■□□□□ 0.05
CCDC188-202ENST00000444532 UTS2BQ765I0 119 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 ZNF676Q8N7Q3 588 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 ZDHHC22Q8N966 263 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 CNIH3Q8TBE1 160 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 NPRL2Q8WTW4 380 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 FGGYQ96C11 551 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 ADAT3Q96EY9 351 aaPredicted RBP15.38■□□□□ 0.05
CCDC188-202ENST00000444532 BORCS8Q96FH0 119 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 ZNF488Q96MN9 340 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 TBX15Q96SF7 602 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 HES4Q9HCC6 221 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms