RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 CAV2P51636 162 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 SMCO1Q147U7 214 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 FOXL2NBQ6ZUU3 175 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 FNDC9Q8TBE3 224 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 GNRHR2Q96P88 292 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 K7EPK0 472 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 SGCEO43556 437 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 F12P00748 615 aaPredicted RBP14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 CYC1P08574 325 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 EPHA8P29322 1005 aaPredicted RBP14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 STARD6P59095 220 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 HIST1H3AP68431 136 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 HIST2H3PS2Q5TEC6 136 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 Q6ZSR3 168 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 HIST2H3AQ71DI3 136 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 DTX1Q86Y01 620 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 FAM71E2Q8N5Q1 922 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 SFT2D1Q8WV19 159 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 NAA11Q9BSU3 229 aaPredicted RBP14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 RRP8O43159 456 aaKnown RBP14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 MED6O75586 246 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 IFNA21P01568 189 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 CTSDP07339 412 aaPredicted RBP14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 CD63P08962 238 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 TMEM225BP0DP42 221 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 RPL12P30050 165 aaKnown RBP14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 RFC3P40938 356 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 MTCP1P56278 107 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 PCOLCEQ15113 449 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 OPN5Q6U736 354 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 UCN2Q96RP3 112 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 NRIP2Q9BQI9 281 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 ULBP2Q9BZM5 246 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 GSN-AS1Q9NRJ2 163 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 ANXA10Q9UJ72 324 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 CST4P01036 141 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 ZNF708P17019 499 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 RPUSD3Q6P087 351 aaKnown RBP14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 MAML2Q8IZL2 1156 aaPredicted RBP14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 TMEM123Q8N131 208 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 OR9K2Q8NGE7 335 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 Q96M66 194 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 BCL2L14Q9BZR8 327 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 FAM96BQ9Y3D0 163 aa14.42□□□□□ -0.1
SEMA3B-207ENST00000441915 EIF3GO75821 320 aaKnown RBP eCLIP14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 FARS2O95363 451 aaKnown RBP14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 CELA2AP08217 269 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 MUC1P15941 1255 aaPredicted RBP14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 RCC1P18754 421 aaPredicted RBP14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 DSCR4P56555 118 aaPredicted RBP14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 CHAF1BQ13112 559 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 TDHQ8IZJ6 230 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 HDHD3Q9BSH5 251 aaPredicted RBP14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 GPR173Q9NS66 373 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 RCC2Q9P258 522 aaKnown RBP14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 PADI1Q9ULC6 663 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 LY6G6EA0A0G2JKS1 128 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 JTBO76095 146 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 ACAA1P09110 424 aaPredicted RBP14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 NPBWR1P48145 328 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 SNAI3Q3KNW1 292 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 OR2A2Q6IF42 318 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 PLXDC2Q6UX71 529 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 SPSB1Q96BD6 273 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 SGK3Q96BR1 496 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 METTL9Q9H1A3 318 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 OCIAD1Q9NX40 245 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 U3KQA8 63 aa14.41□□□□□ -0.1
SEMA3B-207ENST00000441915 CRYM-AS1A6NIL9 109 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 DEDDO75618 318 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 OR5H8P0DN80 308 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 NME2P22392 152 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 LPAR6P43657 344 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 SULT1A2P50226 295 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 RSU1Q15404 277 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 FBXO17Q96EF6 278 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 CPNE2Q96FN4 548 aaPredicted RBP14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 JSRP1Q96MG2 331 aaPredicted RBP14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 UBE2ZQ9H832 354 aaPredicted RBP14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 WDR54Q9H977 334 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 DECR2Q9NUI1 292 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 TUBD1Q9UJT1 453 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 FOXD3Q9UJU5 478 aaPredicted RBP14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 NXT1Q9UKK6 140 aaKnown RBP14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 FBXO24O75426 580 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 CCL3P10147 92 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 RSPO4Q2I0M5 234 aaPredicted RBP14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 FAM27BQ5VT28 67 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 PRRX2Q99811 253 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 ANGPTL4Q9BY76 406 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 ZFP57Q9NU63 452 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 DKKL1Q9UK85 242 aa14.4□□□□□ -0.1
SEMA3B-207ENST00000441915 LOC102723996A0A087X1L8 192 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 RNASEK-C17orf49H0YIS7 233 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 LIFP15018 202 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 FCGR2CP31995 323 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 CXCL12P48061 93 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 KCNJ3P48549 501 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 SPEM2Q0P670 501 aa14.39□□□□□ -0.11
SEMA3B-207ENST00000441915 TAF9Q16594 264 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms