RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 PPP1R35Q8TAP8 253 aa9.47□□□□□ -0.89
UBE2D4-204ENST00000440899 C17orf50Q8WW18 174 aa9.47□□□□□ -0.89
UBE2D4-204ENST00000440899 DNAJC9Q8WXX5 260 aa9.47□□□□□ -0.89
UBE2D4-204ENST00000440899 AJUBAQ96IF1 538 aa9.47□□□□□ -0.89
UBE2D4-204ENST00000440899 OR8B4Q96RC9 309 aa9.47□□□□□ -0.89
UBE2D4-204ENST00000440899 RAB18Q9NP72 206 aa9.47□□□□□ -0.89
UBE2D4-204ENST00000440899 C19orf12Q9NSK7 152 aa9.47□□□□□ -0.89
UBE2D4-204ENST00000440899 DNAJB9Q9UBS3 223 aa9.47□□□□□ -0.89
UBE2D4-204ENST00000440899 CCDC182A6NF36 153 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 J3QT63 122 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 NOS1APO75052 506 aaPredicted RBP9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 DHRS3O75911 302 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 NXPH2O95156 264 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 FAM107AO95990 144 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 MRPL3P09001 348 aaKnown RBP9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 PGA5P0DJD9 388 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 EFNB2P52799 333 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 CRISP1P54107 249 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 LGALS4P56470 323 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 ACTR3P61158 418 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 HERPUD1Q15011 391 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 LY6EQ16553 131 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 CLVS2Q5SYC1 327 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 TMEM200BQ69YZ2 307 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 SPATA24Q86W54 205 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 MKXQ8IYA7 352 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 CD177Q8N6Q3 437 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 OR4C13Q8NGP0 309 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 OR2T27Q8NH04 317 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 RORBQ92753 470 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 PPP1R14AQ96A00 147 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 NRBF2Q96F24 287 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 IKZF2Q9UKS7 526 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 POLDIP2Q9Y2S7 368 aa9.46□□□□□ -0.9
UBE2D4-204ENST00000440899 PRR32B1ATL7 298 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 DLGAP1O14490 977 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 SYNGR1O43759 233 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 FKBP6O75344 327 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 TTRP02766 147 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 HAAOP46952 286 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 CBX1P83916 185 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 FLOT2Q14254 428 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 TMEM42Q69YG0 159 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 CRIP3Q6Q6R5 217 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 LIAT1Q6ZQX7 453 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 C1QL4Q86Z23 238 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 CALHM1Q8IU99 346 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 C11orf42Q8N5U0 333 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 OR2T6Q8NHC8 308 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 ZNF488Q96MN9 340 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 CNN2Q99439 309 aaKnown RBP9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 MNTQ99583 582 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 NRIP2Q9BQI9 281 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 PRRG3Q9BZD7 231 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 RANBP3Q9H6Z4 567 aaPredicted RBP9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 MOB1AQ9H8S9 216 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 PAPOLBQ9NRJ5 636 aaKnown RBP9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 USE1Q9NZ43 259 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 H2AFY2Q9P0M6 372 aaPredicted RBP9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 GTF2A1LQ9UNN4 478 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 COPS3Q9UNS2 423 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 SIGLEC9Q9Y336 463 aa9.45□□□□□ -0.9
UBE2D4-204ENST00000440899 TCRBV3S1A0A5B6 114 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 PQLC2LA1A4F0 135 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 DHRS7CA6NNS2 312 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 LOC110117498-PIK3R3F6TDL0 507 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 SRSF10O75494 262 aaKnown RBP9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 ERVFRD-1P60508 538 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 ESRRGP62508 458 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 MFGE8Q08431 387 aaPredicted RBP9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 PTGES3Q15185 160 aaKnown RBP9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 BCL2L15Q5TBC7 163 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 FAHD1Q6P587 224 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 ZNF322Q6U7Q0 402 aaPredicted RBP9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 ASRGL1Q7L266 308 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 MEPCEQ7L2J0 689 aaKnown RBP9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 ELMOD2Q8IZ81 293 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 OR4M1Q8NGD0 313 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 CFHR4Q92496 578 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 APOL4Q9BPW4 351 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 TTTY10Q9BZA0 68 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 NPFFR1Q9GZQ6 430 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 GPR173Q9NS66 373 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 R4GMQ9 66 aa9.44□□□□□ -0.9
UBE2D4-204ENST00000440899 A0A1B0GTI1 187 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 FAM90A8PA6NJQ4 464 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 VGLL3A8MV65 326 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 GYG2O15488 501 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 PRKYO43930 277 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 OPN1MWP04001 364 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 TK1P04183 234 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 OPN1MW2P0DN77 364 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 OPN1MW3P0DN78 364 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 CCL3L1P16619 93 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 COX7A1P24310 79 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 MPZP25189 248 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 PAX6P26367 422 aa9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 CEBPDP49716 269 aaPredicted RBP9.43□□□□□ -0.9
UBE2D4-204ENST00000440899 DAPP51397 102 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms