RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 UBE2V2Q15819 145 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 GPR157Q5UAW9 335 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 RUSC1-AS1Q66K80 236 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 ACP7Q6ZNF0 438 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 KCTD20Q7Z5Y7 419 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 ANGPTL5Q86XS5 388 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 POC1AQ8NBT0 407 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 FAM216AQ8WUB2 273 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 ZFAND2BQ8WV99 257 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 APH1BQ8WW43 257 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 MED30Q96HR3 178 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 ALG8Q9BVK2 526 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 SIRPDQ9H106 197 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 DNTTIP1Q9H147 329 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 CNTD2Q9H8S5 307 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 ELL3Q9HB65 397 aaPredicted RBP11.35□□□□□ -0.59
LTBR-202ENST00000440421 ONECUT1Q9UBC0 465 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 SLC25A10Q9UBX3 287 aaPredicted RBP11.35□□□□□ -0.59
LTBR-202ENST00000440421 SLC7A11Q9UPY5 501 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 DNAJC9-AS1A6NH13 148 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 SIGLEC5O15389 551 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 CLIC3O95833 236 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 FADS2O95864 444 aaKnown RBP11.34□□□□□ -0.59
LTBR-202ENST00000440421 ACAA1P09110 424 aaPredicted RBP11.34□□□□□ -0.59
LTBR-202ENST00000440421 NDUFB7P17568 137 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 ACTA2P62736 377 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 UBA52P62987 128 aaKnown RBP11.34□□□□□ -0.59
LTBR-202ENST00000440421 ACTG2P63267 376 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 GALEQ14376 348 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 SMN1Q16637 294 aaKnown RBP11.34□□□□□ -0.59
LTBR-202ENST00000440421 TUSC1Q2TAM9 212 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 C11orf91Q3C1V1 193 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 TMEM244Q5VVB8 128 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 C9orf139Q6ZV77 190 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 CALHM1Q8IU99 346 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 ZNRF1Q8ND25 227 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 CCDC54Q8NEL0 328 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 TMEM185AQ8NFB2 350 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 CYGBQ8WWM9 190 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 LHX4Q969G2 390 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 PELI1Q96FA3 418 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 MRPL48Q96GC5 212 aaKnown RBP11.34□□□□□ -0.59
LTBR-202ENST00000440421 RDH12Q96NR8 316 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 DCTN5Q9BTE1 182 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 CHST5Q9GZS9 411 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 ISG20L2Q9H9L3 353 aaKnown RBP11.34□□□□□ -0.59
LTBR-202ENST00000440421 RASL12Q9NYN1 266 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 POLDIP2Q9Y2S7 368 aa11.34□□□□□ -0.59
LTBR-202ENST00000440421 RPL36Q9Y3U8 105 aaKnown RBP11.34□□□□□ -0.59
LTBR-202ENST00000440421 CENPVL3A0A0U1RRI6 287 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 RFPL4AA6NLU0 287 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 RFPL4AL1F8VTS6 287 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 GPR37O15354 613 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 GATBO75879 557 aaKnown RBP11.33□□□□□ -0.6
LTBR-202ENST00000440421 INMTO95050 263 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 NXPH2O95156 264 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 SERPINA3P01011 423 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 IGHA1P01876 353 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 PGA5P0DJD9 388 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 PEX2P28328 305 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 CEBPDP49716 269 aaPredicted RBP11.33□□□□□ -0.6
LTBR-202ENST00000440421 CAPZA1P52907 286 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 RAB40BQ12829 278 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 DEFB112Q30KQ8 113 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 SMIM21Q3B7S5 101 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 FDX2Q6P4F2 183 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 VMO1Q7Z5L0 202 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 PDZD9Q8IXQ8 264 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 CD177Q8N6Q3 437 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 LY6G5BQ8NDX9 201 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 OR52I1Q8NGK6 324 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 OR10AC1Q8NH08 325 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 GCDHQ92947 438 aaPredicted RBP11.33□□□□□ -0.6
LTBR-202ENST00000440421 FGGYQ96C11 551 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 ADAT3Q96EY9 351 aaPredicted RBP11.33□□□□□ -0.6
LTBR-202ENST00000440421 C1orf147Q96MC9 270 aaPredicted RBP11.33□□□□□ -0.6
LTBR-202ENST00000440421 NRIP2Q9BQI9 281 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 ERVK13-1Q9NX77 482 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 ZNF222Q9UK12 451 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 MAB21L2Q9Y586 359 aa11.33□□□□□ -0.6
LTBR-202ENST00000440421 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 A0A1W2PQ09 198 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 NOS1APO75052 506 aaPredicted RBP11.32□□□□□ -0.6
LTBR-202ENST00000440421 WBP4O75554 376 aaKnown RBP11.32□□□□□ -0.6
LTBR-202ENST00000440421 ISG15P05161 165 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 ZNF20P17024 532 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 MPZP25189 248 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 PRDX2P32119 198 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 CCR9P51686 369 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 FUT6P51993 359 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 PRB3Q04118 309 aaPredicted RBP11.32□□□□□ -0.6
LTBR-202ENST00000440421 ALKBH1Q13686 389 aaKnown RBP11.32□□□□□ -0.6
LTBR-202ENST00000440421 PDCD1Q15116 288 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 CNN3Q15417 329 aaKnown RBP11.32□□□□□ -0.6
LTBR-202ENST00000440421 ZNF691Q5VV52 312 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 C12orf54Q6X4T0 127 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 ZNF676Q8N7Q3 588 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 OR51A4Q8NGJ6 313 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 OR13C3Q8NGS6 347 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 CNIH3Q8TBE1 160 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms