RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 DNAJB11Q9UBS4 358 aa9.86□□□□□ -0.83
HSPG2-206ENST00000439717 CLN8Q9UBY8 286 aa9.86□□□□□ -0.83
HSPG2-206ENST00000439717 OR5V1Q9UGF6 321 aa9.86□□□□□ -0.83
HSPG2-206ENST00000439717 DHDHQ9UQ10 334 aa9.86□□□□□ -0.83
HSPG2-206ENST00000439717 ZNF281Q9Y2X9 895 aa9.86□□□□□ -0.83
HSPG2-206ENST00000439717 TLN2Q9Y4G6 2542 aa9.86□□□□□ -0.83
HSPG2-206ENST00000439717 ANK3Q12955 4377 aaKnown RBP9.86□□□□□ -0.83
HSPG2-206ENST00000439717 ZFHX3Q15911 3703 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 ABCA2Q9BZC7 2435 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 IGHV3OR15-7A0A075B7D8 119 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 IGKV1-9A0A0C4DH69 117 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 FAM230AA0A1W2PPH8 454 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 AKR7A2O43488 359 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 ADAM20O43506 726 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 ALX3O95076 343 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 LALBAP00709 142 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 PGA5P0DJD9 388 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 GLRA1P23415 457 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 RBP2P50120 134 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 ATP1B3P54709 279 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 BDH1Q02338 343 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 RBM48Q5RL73 367 aaKnown RBP9.85□□□□□ -0.83
HSPG2-206ENST00000439717 DCAF12L2Q5VW00 463 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 WDR25Q64LD2 544 aaPredicted RBP9.85□□□□□ -0.83
HSPG2-206ENST00000439717 STUMQ69YW2 141 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 DMKNQ6E0U4 476 aaPredicted RBP9.85□□□□□ -0.83
HSPG2-206ENST00000439717 XAF1Q6GPH4 301 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 FAHD2BQ6P2I3 314 aaPredicted RBP9.85□□□□□ -0.83
HSPG2-206ENST00000439717 LHFPL2Q6ZUX7 228 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 SLC36A1Q7Z2H8 476 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 POC1AQ8NBT0 407 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 TRMT10AQ8TBZ6 339 aaKnown RBP9.85□□□□□ -0.83
HSPG2-206ENST00000439717 TSEN15Q8WW01 171 aaKnown RBP9.85□□□□□ -0.83
HSPG2-206ENST00000439717 TMIGD2Q96BF3 282 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 FAHD2AQ96GK7 314 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 CNBD2Q96M20 576 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 MND1Q9BWT6 205 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 WDR13Q9H1Z4 485 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 DUSP21Q9H596 190 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 NLKQ9UBE8 527 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 CTSZQ9UBR2 303 aa9.85□□□□□ -0.83
HSPG2-206ENST00000439717 SIRT4Q9Y6E7 314 aaPredicted RBP9.85□□□□□ -0.83
HSPG2-206ENST00000439717 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.85□□□□□ -0.831e-6■■■■□ 23.8
HSPG2-206ENST00000439717 TRAPPC2LH3BP13 241 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 TMPRSS2O15393 492 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 PHF1O43189 567 aaPredicted RBP9.84□□□□□ -0.83
HSPG2-206ENST00000439717 SYNGR1O43759 233 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 RRP9O43818 475 aaKnown RBP9.84□□□□□ -0.83
HSPG2-206ENST00000439717 CD1AP06126 327 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 CD2P06729 351 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 OCM2P0CE71 109 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 OCMP0CE72 109 aaPredicted RBP9.84□□□□□ -0.83
HSPG2-206ENST00000439717 CRHBPP24387 322 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 AZGP1P25311 298 aaKnown RBP9.84□□□□□ -0.83
HSPG2-206ENST00000439717 ACSM1Q08AH1 577 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 SMIM21Q3B7S5 101 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 YIF1BQ5BJH7 314 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 CD276Q5ZPR3 534 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 ANGPTL5Q86XS5 388 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 CALHM1Q8IU99 346 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 ANGPTL6Q8NI99 470 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 NPRL2Q8WTW4 380 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 RGP1Q92546 391 aaPredicted RBP9.84□□□□□ -0.83
HSPG2-206ENST00000439717 GHSRQ92847 366 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 OPALINQ96PE5 141 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 NRIP2Q9BQI9 281 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 RASSF4Q9H2L5 321 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 PAK1IP1Q9NWT1 392 aaPredicted RBP9.84□□□□□ -0.83
HSPG2-206ENST00000439717 BLOC1S6Q9UL45 172 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 INSIG2Q9Y5U4 225 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 MALRD1Q5VYJ5 2156 aa9.84□□□□□ -0.83
HSPG2-206ENST00000439717 FN1P02751 2386 aaKnown RBP9.83□□□□□ -0.84
HSPG2-206ENST00000439717 IGKV1-27A0A075B6S5 117 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 LOC105371242A0A075B767 164 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 NKX6-3A6NJ46 265 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 OR2AT4A6NND4 320 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 GPR37O15354 613 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 DENRO43583 198 aaKnown RBP9.83□□□□□ -0.84
HSPG2-206ENST00000439717 RGS10O43665 173 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 SULT1B1O43704 296 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 CYB5AP00167 134 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 FAM157CP0CG43 387 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 MTCP1P56278 107 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 GMFBP60983 142 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 ERVK11-1P61568 191 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 PAX2Q02962 417 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 IRF3Q14653 427 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 ZNF529Q6P280 563 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 BTNL3Q6UXE8 466 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 ACP7Q6ZNF0 438 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 PRSS48Q7RTY5 328 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 MKXQ8IYA7 352 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 OR13C9Q8NGT0 318 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 RAB40AQ8WXH6 277 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 SEH1LQ96EE3 360 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 CPNE2Q96FN4 548 aaPredicted RBP9.83□□□□□ -0.84
HSPG2-206ENST00000439717 POM121Q96HA1 1249 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 MED30Q96HR3 178 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 PGLYRP3Q96LB9 341 aa9.83□□□□□ -0.84
HSPG2-206ENST00000439717 CCL13Q99616 98 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms