RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 FCGR1AP12314 374 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 EEF1B2P24534 225 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 SRSF4Q08170 494 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 KLRD1Q13241 179 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 SSX6Q7RTT6 188 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 ZNF573Q86YE8 665 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 OR51G2Q8NGK0 314 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 DPAGT1Q9H3H5 408 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 ELL3Q9HB65 397 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 ZNRD1Q9P1U0 126 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 SNX5Q9Y5X3 404 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 TRBV23-1A0A0A0MS06 115 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 A0A1W2PQ09 198 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 J3QT63 122 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 SYNGR1O43759 233 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 PGA5P0DJD9 388 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 SAA4P35542 130 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 HAAOP46952 286 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 UBE2E1P51965 193 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 TAF9Q16594 264 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 SMIM21Q3B7S5 101 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 CD177Q8N6Q3 437 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 TMEM185AQ8NFB2 350 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 CENPNQ96H22 339 aaPredicted RBP16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 ZNF488Q96MN9 340 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 NRIP2Q9BQI9 281 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 GABARAPL3Q9BY60 117 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 GPR173Q9NS66 373 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 SLC22A13Q9Y226 551 aa16.62■□□□□ 0.25
NCKIPSD-206ENST00000439518 A0A1W2PRD5 423 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 A0A1W2PRF3 423 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 A0A1W2PRM7 423 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 RFPL4AA6NLU0 287 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 RFPL4AL1F8VTS6 287 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 OR2T7P0C7T2 308 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 CCL1P22362 96 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 HTR1FP30939 366 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 ACSM1Q08AH1 577 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 NCR3LG1Q68D85 454 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 TREML4Q6UXN2 200 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 PNKDQ8N490 385 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 OR2T27Q8NH04 317 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 LINC01006Q8NI28 216 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 OAZ3Q9UMX2 235 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 WNK1Q9H4A3 2382 aa16.61■□□□□ 0.25
NCKIPSD-206ENST00000439518 A0A1W2PQL4 384 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 KRT8P05787 483 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 MPZP25189 248 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 PRDX2P32119 198 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 BLMHQ13867 455 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 HCP5Q6MZN7 132 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 GDPGP1Q6ZNW5 385 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 C17orf107Q6ZR85 190 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 CATSPERDQ86XM0 798 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 YIPF7Q8N8F6 280 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 ZSCAN4Q8NAM6 433 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 TBX5Q99593 518 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 CITED1Q99966 193 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 OSBPL10Q9BXB5 764 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 C19orf12Q9NSK7 152 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 POLDIP2Q9Y2S7 368 aa16.6■□□□□ 0.25
NCKIPSD-206ENST00000439518 MEIOCA2RUB1 952 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 A6NIN4 97 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 WIPF1O43516 503 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 RPP14O95059 124 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 APOL3O95236 402 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 KRTAP10-3P60369 221 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 ASRGL1Q7L266 308 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 ZNF561Q8N587 486 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 OR5D13Q8NGL4 314 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 OR8J1Q8NGP2 316 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 RORBQ92753 470 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 HES4Q9HCC6 221 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 VPREB3Q9UKI3 123 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 RNF114Q9Y508 228 aa16.59■□□□□ 0.25
NCKIPSD-206ENST00000439518 NOTCH1P46531 2555 aa16.58■□□□□ 0.25
NCKIPSD-206ENST00000439518 METTL15A6NJ78 407 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 H0YAE9 185 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 SULT1C4O75897 302 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 NXPH2O95156 264 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 CEBPDP49716 269 aaPredicted RBP16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 CAPZA1P52907 286 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 ERVK11-1P61568 191 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 TMED1Q13445 227 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 CALHM1Q8IU99 346 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 FAM185AQ8N0U4 392 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 EME1Q96AY2 570 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 RIBC2Q9H4K1 309 aa16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 SF3B6Q9Y3B4 125 aaKnown RBP16.58■□□□□ 0.24
NCKIPSD-206ENST00000439518 BTBD17A6NE02 478 aa16.57■□□□□ 0.24
NCKIPSD-206ENST00000439518 ANKRD61A6NGH8 418 aa16.57■□□□□ 0.24
NCKIPSD-206ENST00000439518 SLC1A7O00341 560 aa16.57■□□□□ 0.24
NCKIPSD-206ENST00000439518 PAHP00439 452 aa16.57■□□□□ 0.24
NCKIPSD-206ENST00000439518 PROK1P58294 105 aa16.57■□□□□ 0.24
NCKIPSD-206ENST00000439518 RPL31P62899 125 aaKnown RBP16.57■□□□□ 0.24
NCKIPSD-206ENST00000439518 IL24Q13007 206 aa16.57■□□□□ 0.24
NCKIPSD-206ENST00000439518 MIDNQ504T8 468 aa16.57■□□□□ 0.24
NCKIPSD-206ENST00000439518 TMEM200BQ69YZ2 307 aa16.57■□□□□ 0.24
NCKIPSD-206ENST00000439518 Q6ZSV7 163 aa16.57■□□□□ 0.24
NCKIPSD-206ENST00000439518 ANGPTL5Q86XS5 388 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms