RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 IFNA2P01563 188 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 PGA5P0DJD9 388 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 IGHV4-38-2P0DP08 117 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 PSG2P11465 335 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 EPHA1P21709 976 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 MPZP25189 248 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 ACTA2P62736 377 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 ACTG2P63267 376 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 IL18R1Q13478 541 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 DGUOKQ16854 277 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 KLHL22Q53GT1 634 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 TMEM244Q5VVB8 128 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 ASPHD2Q6ICH7 369 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 ACP7Q6ZNF0 438 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 CD177Q8N6Q3 437 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 POC1AQ8NBT0 407 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 RPS4Y2Q8TD47 263 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 SGCDQ92629 289 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 INPP5EQ9NRR6 644 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 ZNF69Q9UC07 566 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 DIMT1Q9UNQ2 313 aaKnown RBP10.98□□□□□ -0.65
LINC00399-201ENST00000439008 MAB21L2Q9Y586 359 aa10.98□□□□□ -0.65
LINC00399-201ENST00000439008 OR2AT4A6NND4 320 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 NOS1APO75052 506 aaPredicted RBP10.97□□□□□ -0.65
LINC00399-201ENST00000439008 SFTPBP07988 381 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 MMP9P14780 707 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 GLRA1P23415 457 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 DCKP27707 260 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 CEBPDP49716 269 aaPredicted RBP10.97□□□□□ -0.65
LINC00399-201ENST00000439008 FGF12P61328 243 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 ERVK11-1P61568 191 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 IKZF1Q13422 519 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 KCNJ8Q15842 424 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 BTN2A1Q7KYR7 527 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 ZNF573Q86YE8 665 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 C8orf59Q8N0T1 100 aaPredicted RBP10.97□□□□□ -0.65
LINC00399-201ENST00000439008 SETD9Q8NE22 299 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 NANPQ8TBE9 248 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 ST8SIA4Q92187 359 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 C12orf43Q96C57 262 aaKnown RBP10.97□□□□□ -0.65
LINC00399-201ENST00000439008 SLC6A7Q99884 636 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 NRIP2Q9BQI9 281 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 PLEKHA1Q9HB21 404 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 ELL3Q9HB65 397 aaPredicted RBP10.97□□□□□ -0.65
LINC00399-201ENST00000439008 HES4Q9HCC6 221 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 TRIM36Q9NQ86 728 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 MTCH1Q9NZJ7 389 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 NLKQ9UBE8 527 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 DNAJB11Q9UBS4 358 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 HSPE1-MOB4S4R3N1 261 aa10.97□□□□□ -0.65
LINC00399-201ENST00000439008 INMTO95050 263 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 ACAA1P09110 424 aaPredicted RBP10.96□□□□□ -0.65
LINC00399-201ENST00000439008 NPY4RP50391 375 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 DLX1P56177 255 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 ST3GAL4Q11206 333 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 UTS2BQ765I0 119 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 PHC2Q8IXK0 858 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 ZNF676Q8N7Q3 588 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 ZNRF1Q8ND25 227 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 LY6G5BQ8NDX9 201 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 ZNF671Q8TAW3 534 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 TMIGD2Q96BF3 282 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 UPRTQ96BW1 309 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 ZNF48Q96MX3 618 aaPredicted RBP10.96□□□□□ -0.65
LINC00399-201ENST00000439008 SPACA5Q96QH8 159 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 TBX15Q96SF7 602 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 SIRPDQ9H106 197 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 OCEL1Q9H607 264 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 ESM1Q9NQ30 184 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 PLCXD1Q9NUJ7 323 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 FKBP14Q9NWM8 211 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 IL36RNQ9UBH0 155 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 PSORS1C1Q9UIG5 152 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 RPUSD1Q9UJJ7 312 aaKnown RBP10.96□□□□□ -0.65
LINC00399-201ENST00000439008 HHLA2Q9UM44 414 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 CAB39Q9Y376 341 aaPredicted RBP10.96□□□□□ -0.65
LINC00399-201ENST00000439008 PCDHGB5Q9Y5G0 923 aa10.96□□□□□ -0.65
LINC00399-201ENST00000439008 DSCAML1Q8TD84 2053 aa10.96□□□□□ -0.66
LINC00399-201ENST00000439008 RFPL4AA6NLU0 287 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 RFPL4AL1F8VTS6 287 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 SIGLEC5O15389 551 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 OGG1O15527 345 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 ENSAO43768 121 aaKnown RBP10.95□□□□□ -0.66
LINC00399-201ENST00000439008 PLATP00750 562 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 ATF1P18846 271 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 C21orf33P30042 268 aaPredicted RBP10.95□□□□□ -0.66
LINC00399-201ENST00000439008 GABRA2P47869 451 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 NPBWR2P48146 333 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 GBX2P52951 348 aaPredicted RBP10.95□□□□□ -0.66
LINC00399-201ENST00000439008 PRB3Q04118 309 aaPredicted RBP10.95□□□□□ -0.66
LINC00399-201ENST00000439008 IL24Q13007 206 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 CDK5R1Q15078 307 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 EGFL6Q8IUX8 553 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 ZFP41Q8N8Y5 198 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 CCDC54Q8NEL0 328 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 OR13C3Q8NGS6 347 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 OR13C5Q8NGS8 318 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 OR5AK2Q8NH90 309 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 GATAD2BQ8WXI9 593 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 PP6455Q8WZ26 134 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms