RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 TIMM8AO60220 97 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TBL1XO60907 577 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ICOSLGO75144 302 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 CRTAPO75718 401 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 UGT2B17O75795 530 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TM7SF2O76062 418 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PROSCO94903 275 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR2F2O95006 317 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 MPZL1O95297 269 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ASS1P00966 412 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 HLA-DRAP01903 254 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 CTSLP07711 333 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PAEPP09466 180 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 CLTAP09496 248 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZCCHC18P0CG32 403 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ANXA3P12429 323 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ATP5A1P25705 553 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 IVDP26440 423 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 LAP3P28838 519 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 CD80P33681 288 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 RPS5P46782 204 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 RPS10P46783 165 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 CAPZBP47756 277 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 RFX3P48380 749 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 GCLMP48507 274 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMED10P49755 219 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLC18A1P54219 525 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 CLDN18P56856 261 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 RWDD2BP57060 319 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 KRTAP10-4P60372 401 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PPP1CAP62136 330 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 YWHAEP62258 255 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 RAB11AP62491 216 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PAX5Q02548 391 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PLOD1Q02809 727 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 CAV1Q03135 178 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 BST2Q10589 180 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLAQ13239 276 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 IL18R1Q13478 541 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ATXN7L3Q14CW9 347 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PTGES3Q15185 160 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 RAB11BQ15907 218 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZBTB6Q15916 424 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TNFAIP8L3Q5GJ75 292 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR2B11Q5JQS5 317 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 AP1ARQ63HQ0 302 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 DUPD1Q68J44 220 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 UFSP1Q6NVU6 142 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 C8orf74Q6P047 294 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM220Q6QAJ8 160 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM107Q6UX40 140 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF836Q6ZNA1 936 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PEX26Q7Z412 305 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ERASQ7Z444 233 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TPRA1Q86W33 373 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ST13P4Q8IZP2 240 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 FAM58AQ8N1B3 248 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 MUC15Q8N387 334 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TCAIMQ8N3R3 496 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 KIF2BQ8N4N8 673 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 UBL4BQ8N7F7 174 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 C15orf54Q8N8G6 183 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PRELID2Q8N945 189 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR13C9Q8NGT0 318 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 RAB1CQ92928 201 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 MYLPFQ96A32 169 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ADIPOR1Q96A54 375 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 LRRC45Q96CN5 670 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TM4SF19Q96DZ7 209 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 MS4A14Q96JA4 679 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 RPRD1AQ96P16 312 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TRNT1Q96Q11 434 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TM2D1Q9BX74 207 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ANKRD60Q9BZ19 345 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 FRMD8P1Q9BZ68 369 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLC25A51Q9H1U9 297 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF385DQ9H6B1 395 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 RANBP3Q9H6Z4 567 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 CSNK1G1Q9HCP0 422 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 MRPL47Q9HD33 250 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 NANSQ9NR45 359 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PNO1Q9NRX1 252 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 PARVAQ9NVD7 372 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 MRPL22Q9NWU5 206 aaKnown RBP1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TREM2Q9NZC2 230 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TBC1D24Q9ULP9 559 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 TFR2Q9UP52 801 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 WDR45Q9Y484 360 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 NPTNQ9Y639 398 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 CACNG2Q9Y698 323 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 MAD1L1Q9Y6D9 718 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 ARHGAP32A7KAX9 2087 aa1.49□□□□□ -2.17
HMGB1P18-201ENST00000438801 IGLV4-60A0A075B6I1 120 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 IGLV2-18A0A075B6J9 118 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 IGKV1D-17A0A075B6S4 117 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TRAV6A0A075B6T7 132 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 IGHV7-81A0A0B4J1V7 117 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 A0A1W2PPV4 95 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 GOLGA8IPA6NC78 632 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 METTL21EPA6NDL7 271 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms