RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PPP1R1AQ13522 171 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 IGF2-ASQ6U949 168 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 ASCL5Q7RTU5 278 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 ZIC4Q8N9L1 334 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 OR2V1Q8NHB1 315 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 TMEM54Q969K7 222 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 RAB3CQ96E17 227 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 F8W036 122 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 SP1P08047 785 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 PRSS12P56730 875 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 BLOC1S1P78537 153 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 SCRN3Q0VDG4 424 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 C10orf128Q5T292 105 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 C1QL2Q7Z5L3 287 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 KCNG3Q8TAE7 436 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 ROBO4Q8WZ75 1007 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 EEF1E1-BLOC1S5C9J1V9 151 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 NME2P1O60361 137 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 IFNA6P05013 189 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 HPNP05981 417 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 AKR1C4P17516 323 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 NME2P22392 152 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 VAMP1P23763 118 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 AGTR1P30556 359 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 PLGLB1Q02325 96 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 KISS1Q15726 138 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 RSPO1Q2MKA7 263 aaPredicted RBP12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 CASTOR1Q8WTX7 329 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 FBXO17Q96EF6 278 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 ARHGAP5-AS1Q96IT6 56 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 PIGMQ9H3S5 423 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 SLC2A8Q9NY64 477 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 KLF13Q9Y2Y9 288 aaPredicted RBP12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 ZNF407Q9C0G0 2248 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 M0R135 149 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 RAD51DO75771 328 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 SCGNO76038 276 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 CRYBA1P05813 215 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 HIST1H1DP16402 221 aaKnown RBP12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 NTF4P34130 210 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 MEOX1P50221 254 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 TMEM50BP56557 158 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 TMEM251Q8N6I4 163 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 OR4K15Q8NH41 348 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 CPNE2Q96FN4 548 aaPredicted RBP12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 ZNF799Q96GE5 643 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 ZNF845Q96IR2 970 aaPredicted RBP12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 ALKBH3Q96Q83 286 aaPredicted RBP12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 COMMD9Q9P000 198 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 MBD2Q9UBB5 411 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 FBLN5Q9UBX5 448 aa12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 FOXD3Q9UJU5 478 aaPredicted RBP12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 PTPRZ1P23471 2315 aaPredicted RBP12.11□□□□□ -0.47
PTCHD3-201ENST00000438700 A0A1B0GW55 424 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 OR2F2O95006 317 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 DUX4L2P0CJ85 424 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 DUX4L3P0CJ86 424 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 DUX4L4P0CJ87 422 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 DUX4L5P0CJ88 424 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 DUX4L6P0CJ89 424 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 DUX4L7P0CJ90 424 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 PGAM2P15259 253 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 ARG2P78540 354 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 IL13RA1P78552 427 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 OR2F1Q13607 317 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 UBE2V2Q15819 145 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 SNAI3Q3KNW1 292 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 ACOT7LQ6ZUV0 252 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 KCTD9Q7L273 389 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 SVBPQ8N300 66 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 THAP6Q8TBB0 222 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 PIGTQ969N2 578 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 SF3B5Q9BWJ5 86 aaKnown RBP12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 ZNF552Q9H707 407 aaPredicted RBP12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 DUX4Q9UBX2 424 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 PIGLQ9Y2B2 252 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 FAM96BQ9Y3D0 163 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 DHRS3O75911 302 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 CHRM2P08172 466 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 CD46P15529 392 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 SERPINA2P20848 420 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 SOX8P57073 446 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 MICBQ29980 383 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 LYG2Q86SG7 212 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 SLC25A42Q86VD7 318 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 PNLDC1Q8NA58 520 aaKnown RBP12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 OR4A4PQ8NGN8 299 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 OR2AE1Q8NHA4 323 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 MARCH1Q8TCQ1 289 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 ELL3Q9HB65 397 aaPredicted RBP12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 CRLF2Q9HC73 371 aa12.1□□□□□ -0.47
PTCHD3-201ENST00000438700 ZNF716A6NP11 495 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 KLRC4-KLRK1H3BQV0 150 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 PATE4P0C8F1 98 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 ZBTB25P24278 435 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 CTSSP25774 331 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms