RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 OCM2P0CE71 109 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 OCMP0CE72 109 aaPredicted RBP9.53□□□□□ -0.88
COL28A1-203ENST00000435823 PRKACBP22694 351 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 TGM4P49221 684 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 ETV1P50549 477 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 ST3GAL4Q11206 333 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 UBE2V2Q15819 145 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 CCDC58Q4VC31 144 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 ARMCX4Q5H9R4 360 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 STUMQ69YW2 141 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 RPL22L1Q6P5R6 122 aaKnown RBP9.53□□□□□ -0.88
COL28A1-203ENST00000435823 AHSA2Q719I0 299 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 C1QL2Q7Z5L3 287 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 STX19Q8N4C7 294 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 POC1AQ8NBT0 407 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 BPIFB6Q8NFQ5 453 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 NPRL2Q8WTW4 380 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 FBLIM1Q8WUP2 373 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 GGHQ92820 318 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 FGGYQ96C11 551 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 SEH1LQ96EE3 360 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 CCL13Q99616 98 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 NUDT16L1Q9BRJ7 211 aaKnown RBP9.53□□□□□ -0.88
COL28A1-203ENST00000435823 PKIBQ9C010 78 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 DNTTIP1Q9H147 329 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 WDR13Q9H1Z4 485 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 NEK6Q9HC98 313 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 SNTG1Q9NSN8 517 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 PLCXD1Q9NUJ7 323 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 WNK2Q9Y3S1 2297 aa9.53□□□□□ -0.88
COL28A1-203ENST00000435823 ARHGAP32A7KAX9 2087 aa9.52□□□□□ -0.88
COL28A1-203ENST00000435823 DOCK11Q5JSL3 2073 aa9.52□□□□□ -0.88
COL28A1-203ENST00000435823 KIR2DS1A0A191URI9 304 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 OR2AT4A6NND4 320 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 E9PI62 339 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 MYL12BO14950 172 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 NDUFB3O43676 98 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 SYNGR1O43759 233 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 XPNPEP2O43895 674 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 ZFPL1O95159 310 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 ECDO95905 644 aaPredicted RBP9.52□□□□□ -0.89
COL28A1-203ENST00000435823 AVPP01185 164 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 PGA5P0DJD9 388 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 ADRA2CP18825 462 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 ATF1P18846 271 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 ATP1B3P54709 279 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 SMIM21Q3B7S5 101 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 C11orf91Q3C1V1 193 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 LRRC10Q5BKY1 277 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 ATPAF1Q5TC12 328 aaPredicted RBP9.52□□□□□ -0.89
COL28A1-203ENST00000435823 OR2G6Q5TZ20 316 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 C1orf229Q6ZS94 237 aaPredicted RBP9.52□□□□□ -0.89
COL28A1-203ENST00000435823 UTS2BQ765I0 119 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 FAM216BQ8N7L0 139 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 DNAAF1Q8NEP3 725 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 OR5T2Q8NGG2 359 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 OR51A4Q8NGJ6 313 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 OR52N1Q8NH53 320 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 TSEN15Q8WW01 171 aaKnown RBP9.52□□□□□ -0.89
COL28A1-203ENST00000435823 ST8SIA4Q92187 359 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 SPSB1Q96BD6 273 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 ADAT3Q96EY9 351 aaPredicted RBP9.52□□□□□ -0.89
COL28A1-203ENST00000435823 MED30Q96HR3 178 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 PDCD1LG2Q9BQ51 273 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 RASSF4Q9H2L5 321 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 BABAM2Q9NXR7 383 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 OPN4Q9UHM6 478 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 PSORS1C1Q9UIG5 152 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 DHDHQ9UQ10 334 aa9.52□□□□□ -0.89
COL28A1-203ENST00000435823 C22orf46C9J442 243 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 GPR37O15354 613 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 NOS1APO75052 506 aaPredicted RBP9.51□□□□□ -0.89
COL28A1-203ENST00000435823 NXPH2O95156 264 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 ATP6V1G2O95670 118 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 CYB5AP00167 134 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 PLATP00750 562 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 LIPFP07098 398 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 PPIAL4GP0DN37 164 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 MPZP25189 248 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 AZGP1P25311 298 aaKnown RBP9.51□□□□□ -0.89
COL28A1-203ENST00000435823 GABRA2P47869 451 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 HSPA13P48723 471 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 RBP2P50120 134 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 GTF2A1P52655 376 aaPredicted RBP9.51□□□□□ -0.89
COL28A1-203ENST00000435823 IL13RA1P78552 427 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 PAX2Q02962 417 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 PAX8Q06710 450 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 IL24Q13007 206 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 IKZF1Q13422 519 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 RIPK1Q13546 671 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 CDK5R1Q15078 307 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 LAIR2Q6ISS4 152 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 IZUMO2Q6UXV1 221 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 ACP7Q6ZNF0 438 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 ZNF788Q6ZQV5 615 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 LIAT1Q6ZQX7 453 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 LHFPL2Q6ZUX7 228 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 ANGPTL5Q86XS5 388 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 CALHM1Q8IU99 346 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 PNLDC1Q8NA58 520 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms