RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 NT5CQ8TCD5 201 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 VAMP8Q9BV40 100 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 A0A087WUJ7 227 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 NRARPQ7Z6K4 114 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 SMIM19Q96E16 107 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 SMIM14Q96QK8 99 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 WDR13Q9H1Z4 485 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 CLN8Q9UBY8 286 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 PCOLCE2Q9UKZ9 415 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 A0A1W2PPQ1 181 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 HMGN4O00479 90 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 PPP6CO00743 305 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 TMPRSS11DO60235 418 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 SEMG1P04279 462 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 MGPP08493 103 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 UBE2MP61081 183 aaKnown RBP10.03□□□□□ -0.8
SCN4A-201ENST00000435607 RNASEKQ6P5S7 137 aaKnown RBP10.03□□□□□ -0.8
SCN4A-201ENST00000435607 ZNF793Q6ZN11 406 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 OR10C1Q96KK4 312 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 SIGLEC11Q96RL6 698 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 SEC11CQ9BY50 192 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 MAGT1Q9H0U3 335 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 MTCH2Q9Y6C9 303 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 ATG2BQ96BY7 2078 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 IGKV3-7A0A075B6H7 116 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 PF4P02776 101 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 CD37P11049 281 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 GPX2P18283 190 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 SRD5A2P31213 254 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 CLPPQ16740 277 aaPredicted RBP10.03□□□□□ -0.8
SCN4A-201ENST00000435607 PRSS45Q7RTY3 260 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 FAAP24Q9BTP7 215 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 LYRM2Q9NU23 88 aaPredicted RBP10.03□□□□□ -0.8
SCN4A-201ENST00000435607 CDRT15L2A8MXV6 281 aa10.02□□□□□ -0.8
SCN4A-201ENST00000435607 SMN1Q16637 294 aaKnown RBP10.02□□□□□ -0.8
SCN4A-201ENST00000435607 DDB2Q92466 427 aa10.02□□□□□ -0.8
SCN4A-201ENST00000435607 A0A1W2PS18 150 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 HOXD4P09016 255 aaPredicted RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 PPP2CBP62714 309 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 PDZK1IP1Q13113 114 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 MUC20Q8N307 709 aaPredicted RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 OR4C5Q8NGB2 326 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 DERL3Q96Q80 235 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 RCL1Q9Y2P8 373 aaKnown RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 NUP98P52948 1817 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 SPRY1O43609 319 aaPredicted RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 ROM1Q03395 351 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 RIGQ13278 110 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 ADIPOQQ15848 244 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 RTN4RL1Q86UN2 441 aaPredicted RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 MYPOPQ86VE0 399 aaPredicted RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 RBPMSQ93062 196 aaKnown RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 SLC25A32Q9H2D1 315 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 GSX1Q9H4S2 264 aaPredicted RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 WSB2Q9NYS7 404 aaPredicted RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 KNDC1Q76NI1 1749 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 MEOX2P50222 304 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 PCBP3P57721 371 aaKnown RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 NANOGP1Q8N7R0 232 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 OR52I2Q8NH67 350 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 SLC25A46Q96AG3 418 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 MRPS16Q9Y3D3 137 aaKnown RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 SYNGR2O43760 224 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 ZNF547Q8IVP9 402 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 MYOZ3Q8TDC0 251 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 TMEM167BQ9NRX6 74 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 WASHC3Q9Y3C0 194 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 TRPM6Q9BX84 2022 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 CDK5RAP2Q96SN8 1893 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 M0R3E3 92 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 RELAQ04206 551 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 ATP6V1FQ16864 119 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 OR4C16Q8NGL9 310 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 OR10D3Q8NH80 312 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 C4orf45Q96LM5 186 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 PRR14Q9BWN1 585 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 NKX6-2Q9C056 277 aaPredicted RBP10.02□□□□□ -0.81
SCN4A-201ENST00000435607 TMED3Q9Y3Q3 217 aa10.02□□□□□ -0.81
SCN4A-201ENST00000435607 HIST1H1BP16401 226 aaKnown RBP10.01□□□□□ -0.81
SCN4A-201ENST00000435607 FHL5Q5TD97 284 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 WDR73Q6P4I2 378 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 NIPSNAP1Q9BPW8 284 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 PIMREGQ9BSJ6 248 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 RGPD1P0DJD0 1748 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 MFSD2BA6NFX1 497 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 SLC35E4Q6ICL7 350 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 ETV3LQ6ZN32 361 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 WFDC3Q8IUB2 231 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 RBM45Q8IUH3 476 aaKnown RBP10.01□□□□□ -0.81
SCN4A-201ENST00000435607 RELL2Q8NC24 303 aaPredicted RBP10.01□□□□□ -0.81
SCN4A-201ENST00000435607 C4BP0C0L5 1744 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 A0A1W2PRD5 423 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 A0A1W2PRF3 423 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 A0A1W2PRM7 423 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 C16orf97H3BN30 126 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 HOXC4P09017 264 aaPredicted RBP10.01□□□□□ -0.81
SCN4A-201ENST00000435607 CD80P33681 288 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 GALR1P47211 349 aa10.01□□□□□ -0.81
SCN4A-201ENST00000435607 GP2P55259 537 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms