RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SCARF2Q96GP6 870 aaPredicted RBP10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 AK3Q9UIJ7 227 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 STRAPQ9Y3F4 350 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 NSG1A0A0A6YYJ2 146 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 FAM24AA6NFZ4 105 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 H3BML4 177 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 STMND1H3BQB6 276 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 GPR137BO60478 399 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 NXPH3O95157 252 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 PTBP3O95758 552 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 CELA2BP08218 269 aaPredicted RBP10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 NOVA1P51513 510 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 RUNX3Q13761 415 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 ABHD5Q8WTS1 349 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 FAM210BQ96KR6 192 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 GINS3Q9BRX5 216 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 PLEKHJ1Q9NW61 149 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 MT-ATP6P00846 226 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 HPNP05981 417 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 SLC6A8P48029 635 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 SPCS3P61009 180 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 TANGO2Q6ICL3 276 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 FAM57BQ71RH2 274 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 NUP54Q7Z3B4 507 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 TMEM217Q8N7C4 229 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 PHOSPHO2Q8TCD6 241 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 RNF133Q8WVZ7 376 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 LIN37Q96GY3 246 aaPredicted RBP10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 THOC3Q96J01 351 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 YPEL4Q96NS1 127 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 SLC7A11Q9UPY5 501 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 WSB1Q9Y6I7 421 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 FAM221AA4D161 298 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 CEACAM18A8MTB9 384 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 SOX15O60248 233 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 DXOO77932 396 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 NR2C1P13056 603 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 ANOS1P23352 680 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 TMEM176BQ3YBM2 270 aaPredicted RBP10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 BRICD5Q6PL45 260 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 OR5AS1Q8N127 324 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 LFNGQ8NES3 379 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 SLC37A2Q8TED4 501 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 HAS2Q92819 552 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 BCO1Q9HAY6 547 aa10.16□□□□□ -0.78
HMGCS1-202ENST00000433297 HSD17B6O14756 317 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 ONECUT2O95948 504 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 GUSBP08236 651 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 OR5H8P0DN80 308 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 BIDP55957 195 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 FBXW4P57775 412 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 TFF2Q03403 129 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 NKAIN1Q4KMZ8 207 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 TMEM123Q8N131 208 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 OR2AJ1Q8NGZ0 328 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 STT3BQ8TCJ2 826 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 TSLPQ969D9 159 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 TVP23CQ96ET8 276 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 ZNF319Q9P2F9 582 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 TUBD1Q9UJT1 453 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 VDAC3Q9Y277 283 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 CLDN16Q9Y5I7 305 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 TLCD2A6NGC4 264 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 APODP05090 189 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 RPL23AP62750 156 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 TLE3Q04726 772 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 GNMTQ14749 295 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 CLEC12BQ2HXU8 276 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 RSPO4Q2I0M5 234 aaPredicted RBP10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 ZNF880Q6PDB4 577 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 ARHGEF39Q8N4T4 335 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 ZNF283Q8N7M2 679 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 RTN4IP1Q8WWV3 396 aaPredicted RBP10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 PECRQ9BY49 303 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 MAGT1Q9H0U3 335 aa10.15□□□□□ -0.78
HMGCS1-202ENST00000433297 PCNX3Q9H6A9 2034 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 ST8SIA3O43173 380 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 PLRG1O43660 514 aaKnown RBP10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 TUBG1P23258 451 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 ATP6V0CP27449 155 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 APLNRP35414 380 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 RABIFP47224 123 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 OR1D4P47884 311 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 POLR2HP52434 150 aaKnown RBP10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 UCP2P55851 309 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 ZNF121P58317 390 aaPredicted RBP10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 PLCXD2Q0VAA5 305 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 HIKESHIQ53FT3 197 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 YAF2Q8IY57 180 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 BMFQ96LC9 184 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 C1orf147Q96MC9 270 aaPredicted RBP10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 HIST1H2BLQ99880 126 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 SUSD2Q9UGT4 822 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 HSF4Q9ULV5 492 aa10.15□□□□□ -0.79
HMGCS1-202ENST00000433297 A6NIZ1 184 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 SHISA8B8ZZ34 492 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 SRP19P09132 144 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 BTF3P20290 206 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 MAS1LP35410 378 aa10.14□□□□□ -0.79
HMGCS1-202ENST00000433297 RAP1BP61224 184 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms