RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 AQP3Q92482 292 aa22.43■■□□□ 1.18
TMEM248-205ENST00000433271 UBTD1Q9HAC8 227 aa22.43■■□□□ 1.18
TMEM248-205ENST00000433271 FBLN5Q9UBX5 448 aa22.43■■□□□ 1.18
TMEM248-205ENST00000433271 DCHS2Q6V1P9 2916 aa22.43■■□□□ 1.18
TMEM248-205ENST00000433271 IGHV3-64DA0A0J9YX35 117 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 CYB5AP00167 134 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 LINC00299Q6ZSB3 139 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 ZCCHC24Q8N2G6 241 aaKnown RBP22.42■■□□□ 1.18
TMEM248-205ENST00000433271 SAMD12Q8N8I0 201 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 CMTM3Q96MX0 182 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 PSMG3-AS1Q96PY0 264 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 METTL9Q9H1A3 318 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 CLEC4MQ9H2X3 399 aaPredicted RBP22.42■■□□□ 1.18
TMEM248-205ENST00000433271 ELL3Q9HB65 397 aaPredicted RBP22.42■■□□□ 1.18
TMEM248-205ENST00000433271 LRBAP50851 2863 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 ARFGEF3Q5TH69 2177 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 IGKV1-12A0A0C4DH73 117 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 TMEM272A0A1B0GTI8 110 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 CDIPTO14735 213 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 LDLRAD4O15165 306 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 HPGDSO60760 199 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 IGKV1D-12P01611 117 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 CD8AP01732 235 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 SOD3P08294 240 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 VSIG8P0DPA2 414 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 S100A5P33763 92 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 GATA4P43694 442 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 GPR176Q14439 515 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 MPPED2Q15777 294 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 PCGF3Q3KNV8 242 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 SLC22A6Q4U2R8 563 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 PRAMEF6Q5VXH4 476 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 C11orf53Q8IXP5 236 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 IL36GQ9NZH8 169 aa22.42■■□□□ 1.18
TMEM248-205ENST00000433271 GCN1Q92616 2671 aaKnown RBP22.41■■□□□ 1.18
TMEM248-205ENST00000433271 SYNGR1O43759 233 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 ZNF780AO75290 641 aaPredicted RBP22.41■■□□□ 1.18
TMEM248-205ENST00000433271 BMP4P12644 408 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 PPOXP50336 477 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 RSU1Q15404 277 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 C11orf71Q6IPW1 123 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 OR2W3Q7Z3T1 314 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 KCNG3Q8TAE7 436 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 ITLN1Q8WWA0 313 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 PTX4Q96A99 478 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 MIXL1Q9H2W2 232 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 KCNK15Q9H427 330 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 POLDIP2Q9Y2S7 368 aa22.41■■□□□ 1.18
TMEM248-205ENST00000433271 A6NLC8 198 aa22.4■■□□□ 1.18
TMEM248-205ENST00000433271 TMEM14DPA8MWL7 114 aa22.4■■□□□ 1.18
TMEM248-205ENST00000433271 SPRNQ5BIV9 151 aa22.4■■□□□ 1.18
TMEM248-205ENST00000433271 OR10K2Q6IF99 312 aa22.4■■□□□ 1.18
TMEM248-205ENST00000433271 LAX1Q8IWV1 398 aa22.4■■□□□ 1.18
TMEM248-205ENST00000433271 SLAMF9Q96A28 289 aa22.4■■□□□ 1.18
TMEM248-205ENST00000433271 TRAF4Q9BUZ4 470 aaPredicted RBP22.4■■□□□ 1.18
TMEM248-205ENST00000433271 EGLN1Q9GZT9 426 aa22.4■■□□□ 1.18
TMEM248-205ENST00000433271 CST11Q9H112 138 aa22.4■■□□□ 1.18
TMEM248-205ENST00000433271 PCDHB16Q9NRJ7 776 aa22.4■■□□□ 1.18
TMEM248-205ENST00000433271 MTCH1Q9NZJ7 389 aa22.4■■□□□ 1.18
TMEM248-205ENST00000433271 RHBDL1O75783 438 aa22.39■■□□□ 1.18
TMEM248-205ENST00000433271 CCL8P80075 99 aa22.39■■□□□ 1.18
TMEM248-205ENST00000433271 UBE2NLQ5JXB2 153 aa22.39■■□□□ 1.18
TMEM248-205ENST00000433271 PLEKHF2Q9H8W4 249 aa22.39■■□□□ 1.18
TMEM248-205ENST00000433271 FN3KRPQ9HA64 309 aa22.39■■□□□ 1.18
TMEM248-205ENST00000433271 DECR2Q9NUI1 292 aa22.39■■□□□ 1.18
TMEM248-205ENST00000433271 UFSP2Q9NUQ7 469 aa22.39■■□□□ 1.18
TMEM248-205ENST00000433271 RAB22AQ9UL26 194 aa22.39■■□□□ 1.18
TMEM248-205ENST00000433271 KDM4BO94953 1096 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 APOA1P02647 267 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 ACAA1P09110 424 aaPredicted RBP22.39■■□□□ 1.17
TMEM248-205ENST00000433271 TNFRSF1AP19438 455 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 RAB6AP20340 208 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 ART1P52961 327 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 PLA2G7Q13093 441 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 UNC119Q13432 240 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 TESK1Q15569 626 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 CDH24Q86UP0 819 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 TMEM104Q8NE00 496 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 OR10K1Q8NGX5 313 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 ERGIC1Q969X5 290 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 SLC25A38Q96DW6 304 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 ADAM30Q9UKF2 790 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 LAMP3Q9UQV4 416 aa22.39■■□□□ 1.17
TMEM248-205ENST00000433271 RAI1Q7Z5J4 1906 aaPredicted RBP22.38■■□□□ 1.17
TMEM248-205ENST00000433271 TRAPPC2LH3BP13 241 aa22.38■■□□□ 1.17
TMEM248-205ENST00000433271 CRTAPO75718 401 aaPredicted RBP22.38■■□□□ 1.17
TMEM248-205ENST00000433271 CSTBP04080 98 aaKnown RBP22.38■■□□□ 1.17
TMEM248-205ENST00000433271 SFTPBP07988 381 aa22.38■■□□□ 1.17
TMEM248-205ENST00000433271 WDR82Q6UXN9 313 aa22.38■■□□□ 1.17
TMEM248-205ENST00000433271 LRRC28Q86X40 367 aaPredicted RBP22.38■■□□□ 1.17
TMEM248-205ENST00000433271 Q8NFD4 153 aa22.38■■□□□ 1.17
TMEM248-205ENST00000433271 FAM46BQ96A09 425 aa22.38■■□□□ 1.17
TMEM248-205ENST00000433271 CEP19Q96LK0 163 aa22.38■■□□□ 1.17
TMEM248-205ENST00000433271 WDFY2Q96P53 400 aa22.38■■□□□ 1.17
TMEM248-205ENST00000433271 ABCG5Q9H222 651 aa22.38■■□□□ 1.17
TMEM248-205ENST00000433271 RHBDL2Q9NX52 303 aa22.38■■□□□ 1.17
TMEM248-205ENST00000433271 CACNA1DQ01668 2161 aa22.38■■□□□ 1.17
TMEM248-205ENST00000433271 DOPEY2Q9Y3R5 2298 aa22.37■■□□□ 1.17
TMEM248-205ENST00000433271 A0A1W2PP11 408 aa22.37■■□□□ 1.17
TMEM248-205ENST00000433271 TPD52L2O43399 206 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms