RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 FAM89BQ8N5H3 189 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 TMEM156Q8N614 296 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 DTWD2Q8NBA8 298 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 TMEM234Q8WY98 164 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 AKR1E2Q96JD6 320 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 C12orf57Q99622 126 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 USB1Q9BQ65 265 aaKnown RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 OCSTAMPQ9BR26 566 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 ABHD14AQ9BUJ0 271 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 SRXN1Q9BYN0 137 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 CHRNA10Q9GZZ6 450 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 RAB33BQ9H082 229 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 OR10A2Q9H208 303 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 METTL7AQ9H8H3 244 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 MYOTQ9UBF9 498 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 B3GALT5Q9Y2C3 310 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 CARHSP1Q9Y2V2 147 aaKnown RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 LSM5Q9Y4Y9 91 aaKnown RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 CHD6Q8TD26 2715 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 RAB19A4D1S5 217 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 F10P00742 488 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 IGLV3-1P01715 115 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 IGHG1P01857 330 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 CCL3P10147 92 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 PVALBP20472 110 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 CCL1P22362 96 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 FPR2P25090 351 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF41P51814 821 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 HNRNPKP61978 463 aaKnown RBP eCLIP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 PJVKQ0ZLH3 352 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 CHAF1BQ13112 559 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 IAH1Q2TAA2 248 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 RHBDD2Q6NTF9 364 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 Q6ZRG5 221 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 SLC16A13Q7RTY0 426 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 OR52M1Q8NGK5 317 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 OR2AJ1Q8NGZ0 328 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 THRSPQ92748 146 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 TOMM40LQ969M1 308 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 AQP10Q96PS8 301 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 SULT4A1Q9BR01 284 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF2Q9BSG1 426 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 FBLN5Q9UBX5 448 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 PIGLQ9Y2B2 252 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF175Q9Y473 711 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 CHCHD2Q9Y6H1 151 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 PTPRZ1P23471 2315 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 CCDC187A0A096LP49 1063 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 ETV2O00321 342 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 SCRG1O75711 98 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 EIF3GO75821 320 aaKnown RBP eCLIP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 NXPH3O95157 252 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 ACAA1P09110 424 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 GSTP1P09211 210 aaKnown RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 NAT2P11245 290 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 RAB13P51153 203 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 FXYD4P59646 89 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 CCL7P80098 99 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 FLI1Q01543 452 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 PDZK1IP1Q13113 114 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 PHLDA2Q53GA4 152 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 THEM4Q5T1C6 240 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 GGNBP1Q5YKI7 109 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 FAHD2BQ6P2I3 314 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 BTNL8Q6UX41 500 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 LYZL2Q7Z4W2 148 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 CPEB2Q7Z5Q1 589 aaKnown RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 PLXDC1Q8IUK5 500 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 SVBPQ8N300 66 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 ZIC4Q8N9L1 334 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 KCNG3Q8TAE7 436 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 RNF141Q8WVD5 230 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 OIT3Q8WWZ8 545 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 ASB13Q8WXK3 278 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 ARL11Q969Q4 196 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 FAHD2AQ96GK7 314 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 PGAM5Q96HS1 289 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 SMIM8Q96KF7 97 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 CRB3Q9BUF7 120 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 FANCFQ9NPI8 374 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 MMP26Q9NRE1 261 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 IL36RNQ9UBH0 155 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 MLXQ9UH92 298 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 AK3Q9UIJ7 227 aa6.25□□□□□ -1.41
COL28A1-202ENST00000430711 NXT1Q9UKK6 140 aaKnown RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 RALYQ9UKM9 306 aaKnown RBP6.25□□□□□ -1.41
COL28A1-202ENST00000430711 IGLV3-12A0A075B6K2 115 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 CCDC163A0A0D9SF12 145 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 KRTAP9-6A0A140TA67 174 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 A6NLC8 198 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF587BE7ETH6 402 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 RNASEK-C17orf49H0YIS7 233 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 MBPP02686 304 aaPredicted RBP6.24□□□□□ -1.41
COL28A1-202ENST00000430711 OR5AC1P0C628 307 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 TMEM225BP0DP42 221 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 GLB1P16278 677 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF43P17038 809 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 FCGR2CP31995 323 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 RFC3P40938 356 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 PPT1P50897 306 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms