RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 LRRC30A6NM36 301 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 F5H0A9 414 aaPredicted RBP10.39□□□□□ -0.75
USP40-205ENST00000430158 J3QT63 122 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 LGALS8O00214 317 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 GPR37O15354 613 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 SYNGR1O43759 233 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 FCN3O75636 299 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 INMTO95050 263 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 SERPINA3P01011 423 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 IGHV2-5P01817 119 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 INHBBP09529 407 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 OCM2P0CE71 109 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 CD37P11049 281 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 FSTP19883 344 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 AMY2BP19961 511 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 PRKACBP22694 351 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 AZGP1P25311 298 aaKnown RBP10.39□□□□□ -0.75
USP40-205ENST00000430158 MDH2P40926 338 aaKnown RBP10.39□□□□□ -0.75
USP40-205ENST00000430158 RPS25P62851 125 aaKnown RBP10.39□□□□□ -0.75
USP40-205ENST00000430158 IL24Q13007 206 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 TMEM249Q2WGJ8 235 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 ZNF404Q494X3 552 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 HAGHLQ6PII5 290 aaPredicted RBP10.39□□□□□ -0.75
USP40-205ENST00000430158 FAM90A1Q86YD7 464 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 SVOPQ8N4V2 548 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 MS4A15Q8N5U1 240 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 C19orf18Q8NEA5 215 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 OR5D14Q8NGL3 314 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 TRMT10AQ8TBZ6 339 aaKnown RBP10.39□□□□□ -0.75
USP40-205ENST00000430158 NPRL2Q8WTW4 380 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 LRRC29Q8WV35 223 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 TSEN15Q8WW01 171 aaKnown RBP10.39□□□□□ -0.75
USP40-205ENST00000430158 SPSB1Q96BD6 273 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 SEH1LQ96EE3 360 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 TIMD4Q96H15 378 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 OR14A2Q96R54 314 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 TMEM246Q9BRR3 403 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 PKIBQ9C010 78 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 WDR13Q9H1Z4 485 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 HES4Q9HCC6 221 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 PPIAL4EA0A075B759 164 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 FAM230AA0A1W2PPH8 454 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 MAGEA13PA6NCF6 341 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 FAM181BA6NEQ2 426 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 FAM157AC9JC47 383 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 PPIAL4DF5H284 164 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 F8VVB4 439 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 F8VWA3 439 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 SMAD7O15105 426 aaKnown RBP10.38□□□□□ -0.75
USP40-205ENST00000430158 SULT1B1O43704 296 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 ALDOBP05062 364 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 WNT2P09544 360 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 HSMCR30P0CW71 290 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 PGA5P0DJD9 388 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 PPIAL4FP0DN26 164 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 IGHV4-31P0DP07 118 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 CD80P33681 288 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 HAAOP46952 286 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 ZP1P60852 638 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 CNN3Q15417 329 aaKnown RBP10.38□□□□□ -0.75
USP40-205ENST00000430158 ACSM3Q53FZ2 586 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 ARMCX4Q5H9R4 360 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 FAM27D1Q5T7N8 215 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 SYT6Q5T7P8 510 aaPredicted RBP10.38□□□□□ -0.75
USP40-205ENST00000430158 CD200R1LQ6Q8B3 271 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 KCTD8Q6ZWB6 473 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 ZNF573Q86YE8 665 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 C1orf87Q8N0U7 546 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 POC1AQ8NBT0 407 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 UFD1Q92890 307 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 SPACA5Q96QH8 159 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 SMR3AQ99954 134 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 NRIP2Q9BQI9 281 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 PATZ1Q9HBE1 687 aaKnown RBP10.38□□□□□ -0.75
USP40-205ENST00000430158 MTCH1Q9NZJ7 389 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 SLC7A11Q9UPY5 501 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 PPIAL4AQ9Y536 164 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 DSCAML1Q8TD84 2053 aa10.38□□□□□ -0.75
USP40-205ENST00000430158 NIPBLQ6KC79 2804 aaeCLIP10.38□□□□□ -0.75
USP40-205ENST00000430158 IGKV1-12A0A0C4DH73 117 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 A0A1W2PPK0 400 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 OOEPA6NGQ2 149 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 CEACAM18A8MTB9 384 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 AKR7A2O43488 359 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 TNFAIP8O95379 198 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 IGKV1D-12P01611 117 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 CD2P06729 351 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 UCHL1P09936 223 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 SMIM18P0DKX4 95 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 TGFBR2P37173 567 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 RBP2P50120 134 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 ATP1B3P54709 279 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 FABP5Q01469 135 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 PDZK1IP1Q13113 114 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 ATPAF1Q5TC12 328 aaPredicted RBP10.37□□□□□ -0.75
USP40-205ENST00000430158 LYPD2Q6UXB3 125 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 ASCL4Q6XD76 172 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 ZNF841Q6ZN19 808 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 LHFPL2Q6ZUX7 228 aa10.37□□□□□ -0.75
USP40-205ENST00000430158 PEG10Q86TG7 708 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms