RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 A0A1B0GWJ7 208 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 A0A1W2PPR1 153 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 MEIOCA2RUB1 952 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 CRTAPO75718 401 aaPredicted RBP7.54□□□□□ -1.2
SMC6-204ENST00000428868 HTR3BO95264 441 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 HLA-DQB1P01920 261 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 CSF3P09919 207 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 OR4A8P0C604 315 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 MGMTP16455 207 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 AGAP20933 346 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 HAAOP46952 286 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 VEGFCP49767 419 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 SNU13P55769 128 aaKnown RBP7.54□□□□□ -1.2
SMC6-204ENST00000428868 SCAND1P57086 179 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 TAS2R20P59543 309 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 DGCR2P98153 550 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 ZNF45Q02386 682 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 GUCA2AQ02747 115 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 MAB21L1Q13394 359 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 DCTN2Q13561 401 aaKnown RBP7.54□□□□□ -1.2
SMC6-204ENST00000428868 PDCD1Q15116 288 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 OR8G1Q15617 311 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 PIGYQ3MUY2 71 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 PYDC2Q56P42 97 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 OLFML2AQ68BL7 652 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 HAGHLQ6PII5 290 aaPredicted RBP7.54□□□□□ -1.2
SMC6-204ENST00000428868 ASCL4Q6XD76 172 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 ZNF826PQ6ZT77 177 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 C11orf53Q8IXP5 236 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 PNLDC1Q8NA58 520 aaKnown RBP7.54□□□□□ -1.2
SMC6-204ENST00000428868 OR5A2Q8NGI9 324 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 OR8S1Q8NH09 359 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 BORCS5Q969J3 196 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 PIK3IP1Q96FE7 263 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 TECTBQ96PL2 329 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 ATG5Q9H1Y0 275 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 OR51I2Q9H344 312 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 ESRP2Q9H6T0 727 aaKnown RBP7.54□□□□□ -1.2
SMC6-204ENST00000428868 ELL3Q9HB65 397 aaPredicted RBP7.54□□□□□ -1.2
SMC6-204ENST00000428868 ABCB10Q9NRK6 738 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 TMEM100Q9NV29 134 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 RBFOX1Q9NWB1 397 aaKnown RBP7.54□□□□□ -1.2
SMC6-204ENST00000428868 MTCH1Q9NZJ7 389 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 POU2F3Q9UKI9 436 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 MRPS7Q9Y2R9 242 aaKnown RBP7.54□□□□□ -1.2
SMC6-204ENST00000428868 SPEF1Q9Y4P9 236 aa7.54□□□□□ -1.2
SMC6-204ENST00000428868 COL12A1Q99715 3063 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 OR5B21A6NL26 309 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 FOXI3A8MTJ6 420 aaPredicted RBP7.53□□□□□ -1.2
SMC6-204ENST00000428868 RAB27BO00194 218 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 SOCS1O15524 211 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 SPRY3O43610 288 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 SSX4O60224 188 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 TMEM127O75204 238 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 UPK1BO75841 260 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 GRPP07492 148 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 CD3EP07766 207 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 IGFBP2P18065 325 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 RAB6AP20340 208 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 TUBG1P23258 451 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 RPS23P62266 143 aaKnown RBP7.53□□□□□ -1.2
SMC6-204ENST00000428868 RPS27AP62979 156 aaKnown RBP7.53□□□□□ -1.2
SMC6-204ENST00000428868 GNG3P63215 75 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 ZNF154Q13106 437 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 MPPED2Q15777 294 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 BEX5Q5H9J7 111 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 PLAC9Q5JTB6 97 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 STEAP3Q658P3 488 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 UNQ6126/PRO20091Q6UXV3 157 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 OR2W3Q7Z3T1 314 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 TGIF2LYQ8IUE0 185 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 LYSMD2Q8IV50 215 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 ZCCHC24Q8N2G6 241 aaKnown RBP7.53□□□□□ -1.2
SMC6-204ENST00000428868 FTMTQ8N4E7 242 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 SCCPDHQ8NBX0 429 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 PXT1Q8NFP0 134 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 OR2Z1Q8NG97 314 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 OR51F2Q8NH61 342 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 RAB40AQ8WXH6 277 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 AQP3Q92482 292 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 LRRC46Q96FV0 321 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 Q96M66 194 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 CMTM3Q96MX0 182 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 HIST1H2AAQ96QV6 131 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 MICU1Q9BPX6 476 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 MRI1Q9BV20 369 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 RTL8AQ9BWD3 113 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 TMEM59Q9BXS4 323 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 SELENOIQ9C0D9 397 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 OCEL1Q9H607 264 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 ZNF442Q9H7R0 627 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 ZMAT3Q9HA38 289 aaKnown RBP7.53□□□□□ -1.2
SMC6-204ENST00000428868 TUBG2Q9NRH3 451 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 UFSP2Q9NUQ7 469 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 FBLN5Q9UBX5 448 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 RAB22AQ9UL26 194 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 RNF115Q9Y4L5 304 aa7.53□□□□□ -1.2
SMC6-204ENST00000428868 DOCK11Q5JSL3 2073 aa7.52□□□□□ -1.21
SMC6-204ENST00000428868 TRAV18A0A075B6X5 111 aa7.52□□□□□ -1.21
SMC6-204ENST00000428868 A0A1W2PQ09 198 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms