RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 KIAA1958Q8N8K9 716 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 TP53I13Q8NBR0 393 aaPredicted RBP8□□□□□ -1.13
CTNND1-208ENST00000428599 NAA50Q9GZZ1 169 aaKnown RBP8□□□□□ -1.13
CTNND1-208ENST00000428599 SCN4AP35499 1836 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 DEFB108AA8MXU0 73 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 UPK1AO00322 258 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 COX6B1P14854 86 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 COL9A1P20849 921 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 KIR2DL1P43626 348 aaPredicted RBP8□□□□□ -1.13
CTNND1-208ENST00000428599 KIR2DL2P43627 348 aaPredicted RBP8□□□□□ -1.13
CTNND1-208ENST00000428599 B4GALNT1Q00973 533 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 TOMM34Q15785 309 aaPredicted RBP8□□□□□ -1.13
CTNND1-208ENST00000428599 TNXAQ16473 311 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 STAC2Q6ZMT1 411 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 DOLPP1Q86YN1 238 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 MARCH1Q8TCQ1 289 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 GATA6Q92908 595 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 HGDQ93099 445 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 SMIM19Q96E16 107 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 ZMAT5Q9UDW3 170 aaKnown RBP8□□□□□ -1.13
CTNND1-208ENST00000428599 FOXJ3Q9UPW0 622 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 PSG11Q9UQ72 335 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 FAM157AC9JC47 383 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 CRISP2P16562 243 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 LYZP61626 148 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 PPP1CBP62140 327 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 ZNF273Q14593 569 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 ASCL5Q7RTU5 278 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 LYG2Q86SG7 212 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 CCDC190Q86UF4 302 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 FADS6Q8N9I5 356 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 HEXA-AS1Q9H8Q6 139 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 ADGRL4Q9HBW9 690 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 ZFP64Q9NPA5 681 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 UQCC1Q9NVA1 299 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 C5orf67F2Z3F1 127 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 M0R296 226 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 KRASP01116 189 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 CD80P33681 288 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 CDC34P49427 236 aaPredicted RBP8□□□□□ -1.13
CTNND1-208ENST00000428599 PCBP3P57721 371 aaKnown RBP8□□□□□ -1.13
CTNND1-208ENST00000428599 DHRS11Q6UWP2 260 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 OR13F1Q8NGS4 319 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 ANGPTL6Q8NI99 470 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 BLNKQ8WV28 456 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 TMEM171Q8WVE6 324 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 PLPPR2Q96GM1 343 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 BCL2L10Q9HD36 194 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 OR6C3Q9NZP0 311 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 ATAD5Q96QE3 1844 aa8□□□□□ -1.13
CTNND1-208ENST00000428599 TUBAL3A6NHL2 446 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 CD37P11049 281 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 PI3P19957 117 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 BSGP35613 385 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 NHLH1Q02575 133 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 NHLH2Q02577 135 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 TCTN1Q2MV58 587 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 TIGD3Q6B0B8 471 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 TGIF2LXQ8IUE1 241 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 TMED6Q8WW62 240 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 OR2A5Q96R48 311 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 SLC25A19Q9HC21 320 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 CBY1Q9Y3M2 126 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 A0A1W2PPQ1 181 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 OR4E1P0C645 316 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 ID1P41134 155 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 SPCS3P61009 180 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 MYPOPQ86VE0 399 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-208ENST00000428599 VSTM2AQ8TAG5 236 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-208ENST00000428599 UFC1Q9Y3C8 167 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 PRKNO60260 465 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-208ENST00000428599 NEURL1O76050 574 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 RPS19P39019 145 aaKnown RBP7.99□□□□□ -1.13
CTNND1-208ENST00000428599 HERVK_113P61574 105 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 LSM11P83369 360 aaKnown RBP eCLIP7.99□□□□□ -1.13
CTNND1-208ENST00000428599 DGCR2P98153 550 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 KCNMB1Q16558 191 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 LYSMD2Q8IV50 215 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 ASB5Q8WWX0 329 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 C19orf43Q9BQ61 176 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 ZNF230Q9UIE0 474 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-208ENST00000428599 IFITM5A6NNB3 132 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 TMEM127O75204 238 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 LYZL6O75951 148 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 MMP7P09237 267 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-208ENST00000428599 HTN1P15515 57 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 ZNF141Q15928 474 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 ANKRD37Q7Z713 158 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 NUP37Q8NFH4 326 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 PRSS3P2Q8NHM4 247 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 ADTRPQ96IZ2 230 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 RNF2Q99496 336 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 MTCH2Q9Y6C9 303 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 IGHV1OR15-9A0A0B4J2B8 117 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 A0A1W2PRD5 423 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 A0A1W2PRF3 423 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 A0A1W2PRM7 423 aa7.99□□□□□ -1.13
CTNND1-208ENST00000428599 GYPAP02724 150 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms