RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 LIAT1Q6ZQX7 453 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 MRPL24Q96A35 216 aaKnown RBP13.31□□□□□ -0.28
C9orf3-204ENST00000424143 SYT3Q9BQG1 590 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 NKX2-4Q9H2Z4 354 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 NELFAQ9H3P2 528 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 UNKLQ9H9P5 680 aaKnown RBP13.31□□□□□ -0.28
C9orf3-204ENST00000424143 ZNF160Q9HCG1 818 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 C19orf12Q9NSK7 152 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 RYDENQ9NUL5 291 aaKnown RBP13.31□□□□□ -0.28
C9orf3-204ENST00000424143 PTRH2Q9Y3E5 179 aaKnown RBP13.31□□□□□ -0.28
C9orf3-204ENST00000424143 MASP2O00187 686 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 OR5H8P0DN80 308 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 ACKR3P25106 362 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 CDAP32320 146 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 SRPXP78539 464 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 H3F3AP84243 136 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 OR8B8Q15620 311 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 ZFP82Q8N141 532 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 LGI3Q8N145 548 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 HPSE2Q8WWQ2 592 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 YPEL4Q96NS1 127 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 NUDT22Q9BRQ3 303 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 METTL9Q9H1A3 318 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 DUSP15Q9H1R2 295 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-204ENST00000424143 GSN-AS1Q9NRJ2 163 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 FGF21Q9NSA1 209 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 PLEKHJ1Q9NW61 149 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 IL36GQ9NZH8 169 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 KLRF1Q9NZS2 232 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 MCTS1Q9ULC4 181 aaKnown RBP13.31□□□□□ -0.28
C9orf3-204ENST00000424143 TMED3Q9Y3Q3 217 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 FER1L5A0AVI2 2057 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 UMAD1C9J7I0 102 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 AP4M1O00189 453 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 TERTO14746 1132 aaKnown RBP13.3□□□□□ -0.28
C9orf3-204ENST00000424143 SGCEO43556 437 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 EIF1BO60739 113 aaKnown RBP13.3□□□□□ -0.28
C9orf3-204ENST00000424143 HEXBP07686 556 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 ZNF728P0DKX0 622 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 SLC2A1P11166 492 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 FCGR2AP12318 317 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 GLB1P16278 677 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 PPT1P50897 306 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 ENDOGQ14249 297 aaKnown RBP13.3□□□□□ -0.28
C9orf3-204ENST00000424143 DEFB133Q30KQ1 61 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 C1orf189Q5VU69 101 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 PRSS58Q8IYP2 241 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 FAM185AQ8N0U4 392 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 SLC22A8Q8TCC7 542 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 WDR77Q9BQA1 342 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-204ENST00000424143 PIGQQ9BRB3 760 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 NAA11Q9BSU3 229 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-204ENST00000424143 TMPRSS5Q9H3S3 457 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 C11orf1Q9H5F2 150 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 PLSCR2Q9NRY7 297 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 ZNF391Q9UJN7 358 aa13.3□□□□□ -0.28
C9orf3-204ENST00000424143 ADAMTS20P59510 1910 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 IGKV1D-8A0A087WSZ0 117 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 C2orf72A6NCS6 295 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 ST8SIA3O43173 380 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 PIAS2O75928 621 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 IFNA17P01571 189 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 EIF2S3P41091 472 aaKnown RBP13.29□□□□□ -0.28
C9orf3-204ENST00000424143 CAMLGP49069 296 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 DLX2Q07687 328 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-204ENST00000424143 CLINT1Q14677 625 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 RAB30Q15771 203 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 CCDC71LQ8N9Z2 235 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 NANPQ8TBE9 248 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 SPTSSAQ969W0 71 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 ERGIC1Q969X5 290 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 MARS2Q96GW9 593 aaKnown RBP13.29□□□□□ -0.28
C9orf3-204ENST00000424143 GNRHR2Q96P88 292 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 SPACA1Q9HBV2 294 aa13.29□□□□□ -0.28
C9orf3-204ENST00000424143 LSM5Q9Y4Y9 91 aaKnown RBP13.29□□□□□ -0.28
C9orf3-204ENST00000424143 A0A087WWC5 75 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 TRBV11-1A0A0K0K1C0 115 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 K7N7A8 449 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 AGPAT2O15120 278 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 CDS2O95674 445 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 MMP9P14780 707 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 SERPINA2P20848 420 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 CSNK1A1P48729 337 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 PIGPP57054 158 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 SRSF7Q16629 238 aaKnown RBP eCLIP13.28□□□□□ -0.284e-7■■■■□ 23.7
C9orf3-204ENST00000424143 RSPO1Q2MKA7 263 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-204ENST00000424143 TSTD1Q8NFU3 115 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 NABP1Q96AH0 204 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 MSI2Q96DH6 328 aaKnown RBP13.28□□□□□ -0.28
C9orf3-204ENST00000424143 MESP1Q9BRJ9 268 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 WFDC1Q9HC57 220 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 KCNJ16Q9NPI9 418 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 ZNF701Q9NV72 531 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-204ENST00000424143 MYOTQ9UBF9 498 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 LHX6Q9UPM6 363 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 TRANK1O15050 2925 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 E9PLN8 166 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 SNRNP70P08621 437 aaKnown RBP13.28□□□□□ -0.28
C9orf3-204ENST00000424143 ZNF806P0C7X5 589 aa13.28□□□□□ -0.28
C9orf3-204ENST00000424143 ZNF14P17017 642 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms