RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ALKBH1Q13686 389 aaKnown RBP9.09□□□□□ -0.95
USP49-204ENST00000423567 SMIM21Q3B7S5 101 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 ATPAF1Q5TC12 328 aaPredicted RBP9.09□□□□□ -0.95
USP49-204ENST00000423567 OGFRL1Q5TC84 451 aaPredicted RBP9.09□□□□□ -0.95
USP49-204ENST00000423567 METTL11BQ5VVY1 283 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 STUMQ69YW2 141 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 FDX2Q6P4F2 183 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 BTN2A1Q7KYR7 527 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 RDH10Q8IZV5 341 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 ZNF676Q8N7Q3 588 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 OR5T2Q8NGG2 359 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 OR52I1Q8NGK6 324 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 TRMT10AQ8TBZ6 339 aaKnown RBP9.09□□□□□ -0.95
USP49-204ENST00000423567 PP6455Q8WZ26 134 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 SEH1LQ96EE3 360 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 PELI1Q96FA3 418 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 BORCS8Q96FH0 119 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 CHST5Q9GZS9 411 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 COMMD4Q9H0A8 199 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 RASSF4Q9H2L5 321 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 SMURF1Q9HCE7 757 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 MRPS18AQ9NVS2 196 aaKnown RBP9.09□□□□□ -0.95
USP49-204ENST00000423567 CHCHD3Q9NX63 227 aaKnown RBP9.09□□□□□ -0.95
USP49-204ENST00000423567 ERVK13-1Q9NX77 482 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 FRRS1LQ9P0K9 344 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 HHLA2Q9UM44 414 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 HSPE1-MOB4S4R3N1 261 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 ERICH4A6NGS2 130 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 H0YAE9 185 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 WBP4O75554 376 aaKnown RBP9.08□□□□□ -0.96
USP49-204ENST00000423567 NXPH2O95156 264 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 FSHBP01225 129 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 ISG15P05161 165 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 CAPGP40121 348 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 GABRA2P47869 451 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 NANOS3P60323 173 aaKnown RBP9.08□□□□□ -0.96
USP49-204ENST00000423567 FGF12P61328 243 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 ELF3P78545 371 aaPredicted RBP9.08□□□□□ -0.96
USP49-204ENST00000423567 TMPRSS11AQ6ZMR5 421 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 USP43Q70EL4 1123 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 C8orf59Q8N0T1 100 aaPredicted RBP9.08□□□□□ -0.96
USP49-204ENST00000423567 FAM216BQ8N7L0 139 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 POC1AQ8NBT0 407 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 OR13C3Q8NGS6 347 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 ANGPTL6Q8NI99 470 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 CNIH3Q8TBE1 160 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 NPRL2Q8WTW4 380 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 DACT3Q96B18 629 aaPredicted RBP9.08□□□□□ -0.96
USP49-204ENST00000423567 UPRTQ96BW1 309 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 SLC6A7Q99884 636 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 PKIBQ9C010 78 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 MS4A7Q9GZW8 240 aaPredicted RBP9.08□□□□□ -0.96
USP49-204ENST00000423567 NEK6Q9HC98 313 aa9.08□□□□□ -0.96
USP49-204ENST00000423567 FGF20Q9NP95 211 aaPredicted RBP9.08□□□□□ -0.96
USP49-204ENST00000423567 TRAV40A0A0B4J280 105 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 TMEM212A6NML5 194 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 ZNF879B4DU55 563 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 TRIM77I1YAP6 450 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 SYNGR1O43759 233 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 NOS1APO75052 506 aaPredicted RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 RGS9O75916 674 aaPredicted RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 TOX4O94842 621 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 CYB5AP00167 134 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 ACAA1P09110 424 aaPredicted RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 PGA5P0DJD9 388 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 NDUFB7P17568 137 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 PRKACBP22694 351 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 TGM4P49221 684 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 CAPZA1P52907 286 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 ATP1B3P54709 279 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 HILS1P60008 231 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 ADARB1P78563 741 aaKnown RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 SLC34A1Q06495 639 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 UBE2V2Q15819 145 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 SMN1Q16637 294 aaKnown RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 GPR157Q5UAW9 335 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 ACP7Q6ZNF0 438 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 ZNF788Q6ZQV5 615 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 CMTM4Q8IZR5 234 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 OR5AK2Q8NH90 309 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 SPATA3Q8NHX4 192 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 TSEN15Q8WW01 171 aaKnown RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 C22orf15Q8WYQ4 148 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 H1FXQ92522 213 aaKnown RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 FGGYQ96C11 551 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 PCGF1Q9BSM1 259 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 JAM3Q9BX67 310 aa9.07□□□□□ -0.96
USP49-204ENST00000423567 ISG20L2Q9H9L3 353 aaKnown RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 SLC25A10Q9UBX3 287 aaPredicted RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 RPUSD1Q9UJJ7 312 aaKnown RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 DIMT1Q9UNQ2 313 aaKnown RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 EXOSC1Q9Y3B2 195 aaKnown RBP9.07□□□□□ -0.96
USP49-204ENST00000423567 ATRQ13535 2644 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 IGHV3OR16-10A0A075B7F0 116 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 TRBV2A0A0J9YWF9 115 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 A0A1B0GW55 424 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 OR4C45A6NMZ5 311 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 H0YHG0 523 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 SLC1A7O00341 560 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 SIGLEC5O15389 551 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms