RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TEX36Q5VZQ5 186 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 FAHD2BQ6P2I3 314 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-202ENST00000421712 FAM90A1Q86YD7 464 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 BATF2Q8N1L9 274 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 OR13C9Q8NGT0 318 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 FAHD2AQ96GK7 314 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 SSBP3Q9BWW4 388 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-202ENST00000421712 WDR13Q9H1Z4 485 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 ZANQ9Y493 2812 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 TLN2Q9Y4G6 2542 aa13.17□□□□□ -0.3
BRAT1-202ENST00000421712 TRAV20A0A0B4J274 112 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 F5H0A9 414 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-202ENST00000421712 TMPRSS2O15393 492 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 MAGEB3O15480 346 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 CYB5AP00167 134 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 PCMT1P22061 227 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 CPT2P23786 658 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 GABRA2P47869 451 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 PITPNBP48739 271 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 POU3F4P49335 361 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 LHFPL2Q6ZUX7 228 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 PRSS48Q7RTY5 328 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 CALHM1Q8IU99 346 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 PARP16Q8N5Y8 322 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 DNAAF1Q8NEP3 725 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 RPS4Y2Q8TD47 263 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 RGP1Q92546 391 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-202ENST00000421712 RFT1Q96AA3 541 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 SPSB1Q96BD6 273 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 ZNF488Q96MN9 340 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 OPALINQ96PE5 141 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 OR5M11Q96RB7 305 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 CCL13Q99616 98 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 SHARPINQ9H0F6 387 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 CLN8Q9UBY8 286 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 LRCH1Q9Y2L9 728 aa13.16□□□□□ -0.3
BRAT1-202ENST00000421712 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.15□□□□□ -0.36e-7■■■□□ 17.2
BRAT1-202ENST00000421712 NXPH2O95156 264 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 RAB3AP20336 220 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 ZFP36P26651 326 aaKnown RBP13.15□□□□□ -0.3
BRAT1-202ENST00000421712 IRF3Q14653 427 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 CR1LQ2VPA4 569 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 YIF1BQ5BJH7 314 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 DCAF12L2Q5VW00 463 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 SLC25A26Q70HW3 274 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 SLC36A1Q7Z2H8 476 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 SATL1Q86VE3 508 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 POC1AQ8NBT0 407 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 OR13C5Q8NGS8 318 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 TMEM106AQ96A25 262 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 C12orf43Q96C57 262 aaKnown RBP13.15□□□□□ -0.3
BRAT1-202ENST00000421712 SPACA5Q96QH8 159 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 BEX2Q9BXY8 128 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 PKIBQ9C010 78 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 RASL12Q9NYN1 266 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 TAS2R4Q9NYW5 299 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 NLKQ9UBE8 527 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 OR5V1Q9UGF6 321 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 ARHGAP32A7KAX9 2087 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 DOCK11Q5JSL3 2073 aa13.15□□□□□ -0.3
BRAT1-202ENST00000421712 IGKV1-27A0A075B6S5 117 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 A0A0G2JMP0 313 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 A0A0X1KG70 313 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 NKX6-3A6NJ46 265 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-202ENST00000421712 SULT1B1O43704 296 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 PGA5P0DJD9 388 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 HNF1AP20823 631 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 MAP2K4P45985 399 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 PPP3R1P63098 170 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 BDH1Q02338 343 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 IL24Q13007 206 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 SMIM21Q3B7S5 101 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 MKXQ8IYA7 352 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 OR4M2Q8NGB6 313 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 SLAMF9Q96A28 289 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 PGLYRP3Q96LB9 341 aa13.14□□□□□ -0.31
BRAT1-202ENST00000421712 A0A1W2PPK0 400 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 OR2AT4A6NND4 320 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 MPZP25189 248 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 NPY4RP50391 375 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 ACSM1Q08AH1 577 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 IKZF1Q13422 519 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 CHRFAM7AQ494W8 412 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 Q499Y3 187 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 FAM120AOSQ5T036 256 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 WDR25Q64LD2 544 aaPredicted RBP13.13□□□□□ -0.31
BRAT1-202ENST00000421712 ACP7Q6ZNF0 438 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 IL17RELQ6ZVW7 336 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 OR5D18Q8NGL1 313 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 ST8SIA4Q92187 359 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 UFD1Q92890 307 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 CEP19Q96LK0 163 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 OR14A2Q96R54 314 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 GPER1Q99527 375 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 TMED9Q9BVK6 235 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 YTHDF1Q9BYJ9 559 aaKnown RBP13.13□□□□□ -0.31
BRAT1-202ENST00000421712 CTSZQ9UBR2 303 aa13.13□□□□□ -0.31
BRAT1-202ENST00000421712 CKLFQ9UBR5 152 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms