RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	KCNE5	Q9UJ90	142 aa		11.74	□□□□□ -0.53
BDNF-208	ENST00000418212	ELF5	Q9UKW6	265 aa	Predicted RBP	11.74	□□□□□ -0.53
BDNF-208	ENST00000418212	OR4C45	A6NMZ5	311 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	IAPP	P10997	89 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	CD96	P40200	585 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	UBE2K	P61086	200 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	RPS4X	P62701	263 aa	Known RBP	11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	ZNF273	Q14593	569 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	TUSC5	Q8IXB3	177 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	OR2Z1	Q8NG97	314 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	OR8B12	Q8NGG6	310 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	ST7L	Q8TDW4	575 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	MSI2	Q96DH6	328 aa	Known RBP	11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	ZNF385A	Q96PM9	386 aa	Known RBP	11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	RIMS4	Q9H426	269 aa	Predicted RBP	11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	OPA3	Q9H6K4	179 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	FOXJ3	Q9UPW0	622 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	SSSCA1	O60232	199 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	CDC14B	O60729	498 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	SNAPIN	O95295	136 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	AADAC	P22760	399 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	THBS4	P35443	961 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	SNTB1	Q13884	538 aa	Known RBP	11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	RAB35	Q15286	201 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	ARHGEF39	Q8N4T4	335 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	RFLNB	Q8N5W9	214 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	ZNF407	Q9C0G0	2248 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	GREB1	Q4ZG55	1949 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	NME2P1	O60361	137 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	CST7	O76096	145 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	CTXN2	P0C2S0	81 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	CD80	P33681	288 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	RPS16	P62249	146 aa	Known RBP	11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	RPS23	P62266	143 aa	Known RBP	11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	CRIPAK	Q8N1N5	446 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	WDFY2	Q96P53	400 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	MARVELD1	Q9BSK0	173 aa		11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	LAMA2	P24043	3122 aa	Known RBP	11.73	□□□□□ -0.53
BDNF-208	ENST00000418212	NKX6-3	A6NJ46	265 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	SERPINE3	A8MV23	424 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	FABP1	P07148	127 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	GNG3	P63215	75 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	TMEM91	Q6ZNR0	172 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	ACOT7L	Q6ZUV0	252 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	CDH26	Q8IXH8	852 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	OR6X1	Q8NH79	312 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	SPSB1	Q96BD6	273 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	NXF2	Q9GZY0	626 aa	Known RBP	11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	PURG	Q9UJV8	347 aa	Known RBP	11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	URGCP-MRPS24	S4R325	110 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	KRAS	P01116	189 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	OR13C7	P0DN81	318 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	IL11	P20809	199 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	MEOX2	P50222	304 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	MGAT2	Q10469	447 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	LCN15	Q6UWW0	184 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	HIPK2	Q9H2X6	1198 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	CXCL3	P19876	107 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	ECI1	P42126	302 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	SST	P61278	116 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	ZXDA	P98168	799 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	ST3GAL2	Q16842	350 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	PLA1A	Q53H76	456 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	SLC16A13	Q7RTY0	426 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	MRGPRE	Q86SM8	312 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	MRPL41	Q8IXM3	137 aa	Known RBP	11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	SLC30A7	Q8NEW0	376 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	CHST6	Q9GZX3	395 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	GHRL	Q9UBU3	117 aa		11.72	□□□□□ -0.53
BDNF-208	ENST00000418212	SULT1C2	O00338	296 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	SCAF4	O95104	1147 aa	Known RBP	11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	IGHA1	P01876	353 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	RPL12	P30050	165 aa	Known RBP	11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	ARL3	P36405	182 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	GPR12	P47775	334 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	SCARB1	Q8WTV0	552 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	YIPF5	Q969M3	257 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	CXorf58	Q96LI9	332 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	ARV1	Q9H2C2	271 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	MIXL1	Q9H2W2	232 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212		A0A1W2PQM1	296 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	SCGB2A1	O75556	95 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	OR2F2	O95006	317 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	HIST1H1D	P16402	221 aa	Known RBP	11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	CHAT	P28329	748 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	PRDX4	Q13162	271 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	TMEM128	Q5BJH2	165 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	DCAF10	Q5QP82	559 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	H3F3C	Q6NXT2	135 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	LYG2	Q86SG7	212 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212	WDSUB1	Q8N9V3	476 aa		11.71	□□□□□ -0.53
BDNF-208	ENST00000418212		A0A1W2PQD3	144 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	SIGLEC5	O15389	551 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	CNIH1	O95406	144 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	S100A12	P80511	92 aa		11.71	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms