RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 DNAJB11Q9UBS4 358 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 MIOXQ9UGB7 285 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 ZNF281Q9Y2X9 895 aa10.42□□□□□ -0.74
SKA1-203ENST00000417656 ANK3Q12955 4377 aaKnown RBP10.42□□□□□ -0.74
SKA1-203ENST00000417656 FN1P02751 2386 aaKnown RBP10.41□□□□□ -0.74
SKA1-203ENST00000417656 HIVEP2P31629 2446 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 TRBV5-5A0A0J9YX44 114 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 A0A1B0GW55 424 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 KIAA1324LA8MWY0 1029 aaPredicted RBP10.41□□□□□ -0.74
SKA1-203ENST00000417656 A8MXK9 166 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 PHF1O43189 567 aaPredicted RBP10.41□□□□□ -0.74
SKA1-203ENST00000417656 ADAM20O43506 726 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 TFF1P04155 84 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 WNT2P09544 360 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 OCM2P0CE71 109 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 OCMP0CE72 109 aaPredicted RBP10.41□□□□□ -0.74
SKA1-203ENST00000417656 DUX4L2P0CJ85 424 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 DUX4L3P0CJ86 424 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 DUX4L4P0CJ87 422 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 DUX4L5P0CJ88 424 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 DUX4L6P0CJ89 424 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 DUX4L7P0CJ90 424 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 MUC1P15941 1255 aaPredicted RBP10.41□□□□□ -0.74
SKA1-203ENST00000417656 CELP19835 753 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 PRKACBP22694 351 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 GLRA1P23415 457 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 EEF1B2P24534 225 aaKnown RBP10.41□□□□□ -0.74
SKA1-203ENST00000417656 MPZP25189 248 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 ZFP36P26651 326 aaKnown RBP10.41□□□□□ -0.74
SKA1-203ENST00000417656 MAP2K4P45985 399 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 PITPNBP48739 271 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 POU3F4P49335 361 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 FUT6P51993 359 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 RPS11P62280 158 aaKnown RBP eCLIP10.41□□□□□ -0.74
SKA1-203ENST00000417656 BDH1Q02338 343 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 SPHARQ15513 63 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 KCNJ8Q15842 424 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 MICBQ29980 383 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 STUMQ69YW2 141 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 ASPHD2Q6ICH7 369 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 DUX4L9Q6RFH8 374 aaPredicted RBP10.41□□□□□ -0.74
SKA1-203ENST00000417656 NLRC3Q7RTR2 1065 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 PRSS48Q7RTY5 328 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 PARP16Q8N5Y8 322 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 POC1AQ8NBT0 407 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 DNAAF1Q8NEP3 725 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 ZNF671Q8TAW3 534 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 TMEM106AQ96A25 262 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 RFT1Q96AA3 541 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 TMEM186Q96B77 213 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 SPSB1Q96BD6 273 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 SPACA5Q96QH8 159 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 SSBP3Q9BWW4 388 aaPredicted RBP10.41□□□□□ -0.74
SKA1-203ENST00000417656 PKIBQ9C010 78 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 ZCCHC4Q9H5U6 513 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 HIF1ANQ9NWT6 349 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 DUX4Q9UBX2 424 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 LRCH1Q9Y2L9 728 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 POLDIP2Q9Y2S7 368 aa10.41□□□□□ -0.74
SKA1-203ENST00000417656 TRAV20A0A0B4J274 112 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 SULT1B1O43704 296 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 FOXH1O75593 365 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 CD2P06729 351 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 HCKP08631 526 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 PGA5P0DJD9 388 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 RBP2P50120 134 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 ATP1B3P54709 279 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 GABARAPL2P60520 117 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 GNB2P62879 340 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 ACSM1Q08AH1 577 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 IL24Q13007 206 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 YIF1BQ5BJH7 314 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 LHFPL2Q6ZUX7 228 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 IL17RELQ6ZVW7 336 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 SLC25A26Q70HW3 274 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 RNF144BQ7Z419 303 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 SERPINA12Q8IW75 414 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 FAM216BQ8N7L0 139 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 OR5T2Q8NGG2 359 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 OR51A2Q8NGJ7 313 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 SLAMF9Q96A28 289 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 TMIGD2Q96BF3 282 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 ORAI1Q96D31 301 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 OR14A2Q96R54 314 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 CCL13Q99616 98 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 NRIP2Q9BQI9 281 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 RASSF4Q9H2L5 321 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 SMURF1Q9HCE7 757 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 NLKQ9UBE8 527 aa10.4□□□□□ -0.74
SKA1-203ENST00000417656 SONP18583 2426 aaKnown RBP10.4□□□□□ -0.74
SKA1-203ENST00000417656 ARHGAP32A7KAX9 2087 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 NKX6-3A6NJ46 265 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 TNFRSF13BO14836 293 aaPredicted RBP10.39□□□□□ -0.75
SKA1-203ENST00000417656 TMPRSS2O15393 492 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 SPRY1O43609 319 aaPredicted RBP10.39□□□□□ -0.75
SKA1-203ENST00000417656 FCN3O75636 299 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 INMTO95050 263 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 NXPH2O95156 264 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 SELLP14151 372 aa10.39□□□□□ -0.75
SKA1-203ENST00000417656 AMY2BP19961 511 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms