RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SEH1LQ96EE3 360 aa14.89□□□□□ -0.03
VCP-202ENST00000417448 MRPL48Q96GC5 212 aaKnown RBP14.89□□□□□ -0.03
VCP-202ENST00000417448 MICU1Q9BPX6 476 aa14.89□□□□□ -0.03
VCP-202ENST00000417448 PDCD1LG2Q9BQ51 273 aa14.89□□□□□ -0.03
VCP-202ENST00000417448 JAM3Q9BX67 310 aa14.89□□□□□ -0.03
VCP-202ENST00000417448 ANKRD60Q9BZ19 345 aa14.89□□□□□ -0.03
VCP-202ENST00000417448 PATZ1Q9HBE1 687 aaKnown RBP14.89□□□□□ -0.03
VCP-202ENST00000417448 ERVK-18Q9QC07 812 aa14.89□□□□□ -0.03
VCP-202ENST00000417448 ENPP5Q9UJA9 477 aa14.89□□□□□ -0.03
VCP-202ENST00000417448 EXOSC1Q9Y3B2 195 aaKnown RBP14.89□□□□□ -0.03
VCP-202ENST00000417448 MPC1Q9Y5U8 109 aa14.89□□□□□ -0.03
VCP-202ENST00000417448 IGHV3OR15-7A0A075B7D8 119 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 TRAV40A0A0B4J280 105 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 ANXA2P2A6NMY6 339 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 SRRM5B3KS81 715 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 ZNF732B4DXR9 585 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 G3V4G9 280 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 CDIPTO14735 213 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 PIN1P1O15428 100 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 PLXNB1O43157 2135 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 MTRF1O75570 445 aaKnown RBP14.88□□□□□ -0.03
VCP-202ENST00000417448 NRASP01111 189 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 MYL12AP19105 171 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 CCL1P22362 96 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 GATA4P43694 442 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 DEFB112Q30KQ8 113 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 CELF2-AS1Q8N7Q2 184 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 ZNF676Q8N7Q3 588 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 SPERTQ8NA61 448 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 FAM110DQ8TAY7 271 aaPredicted RBP14.88□□□□□ -0.03
VCP-202ENST00000417448 TRMT10AQ8TBZ6 339 aaKnown RBP14.88□□□□□ -0.03
VCP-202ENST00000417448 ADAT3Q96EY9 351 aaPredicted RBP14.88□□□□□ -0.03
VCP-202ENST00000417448 HIST1H2AAQ96QV6 131 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 CHIAQ9BZP6 476 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 PRDM13Q9H4Q3 707 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 FN3KRPQ9HA64 309 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 FKBP14Q9NWM8 211 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 C14orf119Q9NWQ9 140 aa14.88□□□□□ -0.03
VCP-202ENST00000417448 CAB39Q9Y376 341 aaPredicted RBP14.88□□□□□ -0.03
VCP-202ENST00000417448 NOP16Q9Y3C1 178 aaKnown RBP14.88□□□□□ -0.03
VCP-202ENST00000417448 DNAH3Q8TD57 4116 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 PNMA8CA0A1B0GUJ8 204 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 IRGMA1A4Y4 181 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 F5H0A9 414 aaPredicted RBP14.87□□□□□ -0.03
VCP-202ENST00000417448 ZFPL1O95159 310 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 PIPP12273 146 aaPredicted RBP14.87□□□□□ -0.03
VCP-202ENST00000417448 ATP6V1B1P15313 513 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 BTG1P62324 171 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 PAX2Q02962 417 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 SLC3A1Q07837 685 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 BATF2Q8N1L9 274 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 SCCPDHQ8NBX0 429 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 OR11L1Q8NGX0 322 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 UPRTQ96BW1 309 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 FGGYQ96C11 551 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 RTL8AQ9BWD3 113 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 TMEM165Q9HC07 324 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 CHCHD3Q9NX63 227 aaKnown RBP14.87□□□□□ -0.03
VCP-202ENST00000417448 CNOT2Q9NZN8 540 aaKnown RBP14.87□□□□□ -0.03
VCP-202ENST00000417448 RNF7Q9UBF6 113 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 COL7A1Q02388 2944 aa14.87□□□□□ -0.03
VCP-202ENST00000417448 TRBV2A0A0J9YWF9 115 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 RHBDL1O75783 438 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 PTBP3O95758 552 aaKnown RBP14.86□□□□□ -0.03
VCP-202ENST00000417448 TFF1P04155 84 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 CDK1P06493 297 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 UBCP0CG48 685 aaKnown RBP14.86□□□□□ -0.03
VCP-202ENST00000417448 PPIAL4GP0DN37 164 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 IRF2P14316 349 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 HSPA13P48723 471 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 CCR9P51686 369 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 UBE2V2Q15819 145 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 CLVS2Q5SYC1 327 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 TMEM244Q5VVB8 128 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 LYPD2Q6UXB3 125 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 BRD3OSQ6XYD6 125 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 TMPRSS11AQ6ZMR5 421 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 Q6ZSR3 168 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 RNF144BQ7Z419 303 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 LRRC28Q86X40 367 aaPredicted RBP14.86□□□□□ -0.03
VCP-202ENST00000417448 FTMTQ8N4E7 242 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 Q8TCH9 128 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 LRRC29Q8WV35 223 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 RGP1Q92546 391 aaPredicted RBP14.86□□□□□ -0.03
VCP-202ENST00000417448 PLEKHA1Q9HB21 404 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 BABAM2Q9NXR7 383 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 RAB26Q9ULW5 256 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 RNF114Q9Y508 228 aa14.86□□□□□ -0.03
VCP-202ENST00000417448 TENM3Q9P273 2699 aa14.85□□□□□ -0.03
VCP-202ENST00000417448 FAM230AA0A1W2PPH8 454 aa14.85□□□□□ -0.03
VCP-202ENST00000417448 ANKRD61A6NGH8 418 aa14.85□□□□□ -0.03
VCP-202ENST00000417448 LRRC30A6NM36 301 aa14.85□□□□□ -0.03
VCP-202ENST00000417448 INMTO95050 263 aa14.85□□□□□ -0.03
VCP-202ENST00000417448 CRYBA1P05813 215 aa14.85□□□□□ -0.03
VCP-202ENST00000417448 SNCBQ16143 134 aa14.85□□□□□ -0.03
VCP-202ENST00000417448 CEACAM21Q3KPI0 293 aa14.85□□□□□ -0.03
VCP-202ENST00000417448 KPRPQ5T749 579 aaPredicted RBP14.85□□□□□ -0.03
VCP-202ENST00000417448 TMEM42Q69YG0 159 aa14.85□□□□□ -0.03
VCP-202ENST00000417448 WDR82Q6UXN9 313 aa14.85□□□□□ -0.03
VCP-202ENST00000417448 SPICQ8N5J4 248 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms