RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 NCR3LG1Q68D85 454 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 C12orf73Q69YU5 71 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 KRT74Q7RTS7 529 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 SSX6Q7RTT6 188 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 AMIGO2Q86SJ2 522 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 CD177Q8N6Q3 437 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 POC1AQ8NBT0 407 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 OR51G2Q8NGK0 314 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 TMEM163Q8TC26 289 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 NPRL2Q8WTW4 380 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 C17orf50Q8WW18 174 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 MRM2Q9UI43 246 aaKnown RBP12.71□□□□□ -0.37
ACTB-202ENST00000414620 OR52A1Q9UKL2 312 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 SLC22A13Q9Y226 551 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 R4GMQ9 66 aa12.71□□□□□ -0.37
ACTB-202ENST00000414620 MGAM2Q2M2H8 2515 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 SLC22A31A6NKX4 558 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 G3V2T6 193 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 J3QT63 122 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 MTRF1O75570 445 aaKnown RBP12.7□□□□□ -0.38
ACTB-202ENST00000414620 PAX6P26367 422 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 PROK1P58294 105 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 SMIM21Q3B7S5 101 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 HCP5Q6MZN7 132 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 ASRGL1Q7L266 308 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 OR14K1Q8NGZ2 314 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 TRMT10AQ8TBZ6 339 aaKnown RBP12.7□□□□□ -0.38
ACTB-202ENST00000414620 SDSLQ96GA7 329 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 METTL8Q9H825 291 aaKnown RBP12.7□□□□□ -0.38
ACTB-202ENST00000414620 MOB1AQ9H8S9 216 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 OR14J1Q9UGF5 321 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 V9GYS6 101 aa12.7□□□□□ -0.38
ACTB-202ENST00000414620 A0A1B0GTI1 187 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 PGA5P0DJD9 388 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 UBE2E1P51965 193 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 LY6EQ16553 131 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 MIDNQ504T8 468 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 CLVS2Q5SYC1 327 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 KDM4DQ6B0I6 523 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 ELMOD2Q8IZ81 293 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 YIPF7Q8N8F6 280 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 ZSCAN4Q8NAM6 433 aaPredicted RBP12.69□□□□□ -0.38
ACTB-202ENST00000414620 OR4M1Q8NGD0 313 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 RORBQ92753 470 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 GABARAPL1Q9H0R8 117 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 PPA2Q9H2U2 334 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 CLN6Q9NWW5 311 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 SNX5Q9Y5X3 404 aa12.69□□□□□ -0.38
ACTB-202ENST00000414620 TRBV23-1A0A0A0MS06 115 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 PQLC2LA1A4F0 135 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 ANKRD61A6NGH8 418 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 H3BUX3 64 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 M0QZ24 198 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 TIMM23O14925 209 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 CLPXO76031 633 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 NXPH2O95156 264 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 CCL3L1P16619 93 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 COX7A1P24310 79 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 FASP25445 335 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 PRDX2P32119 198 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 ERVFRD-1P60508 538 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 ACTR3P61158 418 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 EFNB1P98172 346 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 EGR3Q06889 387 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 BNIP1Q12981 228 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 C1orf146Q5VVC0 180 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 TMEM42Q69YG0 159 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 ASPHD2Q6ICH7 369 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 ZNF573Q86YE8 665 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 GID4Q8IVV7 300 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 MNTQ99583 582 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 CIB1Q99828 191 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 RBM4BQ9BQ04 359 aaKnown RBP12.68□□□□□ -0.38
ACTB-202ENST00000414620 TCF7L1Q9HCS4 588 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 FAM53CQ9NYF3 392 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 RASL12Q9NYN1 266 aa12.68□□□□□ -0.38
ACTB-202ENST00000414620 SF3B6Q9Y3B4 125 aaKnown RBP12.68□□□□□ -0.38
ACTB-202ENST00000414620 FAM230AA0A1W2PPH8 454 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 SLC1A7O00341 560 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 TSPAN15O95858 294 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 KRT8P05787 483 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 PIPP12273 146 aaPredicted RBP12.67□□□□□ -0.38
ACTB-202ENST00000414620 POLR2IP36954 125 aaKnown RBP12.67□□□□□ -0.38
ACTB-202ENST00000414620 RPL31P62899 125 aaKnown RBP12.67□□□□□ -0.38
ACTB-202ENST00000414620 ACSM1Q08AH1 577 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 ZNF273Q14593 569 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 ANGPTL5Q86XS5 388 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 CALHM1Q8IU99 346 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 ZDHHC13Q8IUH4 622 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 OR5D13Q8NGL4 314 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 OR5R1Q8NH85 324 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 ITFG2Q969R8 447 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 SSX3Q99909 188 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 RIBC2Q9H4K1 309 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 PLEKHA1Q9HB21 404 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 POLDIP2Q9Y2S7 368 aa12.67□□□□□ -0.38
ACTB-202ENST00000414620 AP4S1Q9Y587 144 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms