RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 GABRA2P47869 451 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 ARF6P62330 175 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 ACTA2P62736 377 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 ACTG2P63267 376 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 IL13RA1P78552 427 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 RAB40BQ12829 278 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 GALEQ14376 348 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 SMN1Q16637 294 aaKnown RBP12.24□□□□□ -0.45
LIMS4-201ENST00000413601 DGUOKQ16854 277 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 C11orf91Q3C1V1 193 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 TMEM244Q5VVB8 128 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 METTL11BQ5VVY1 283 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 RBMS3Q6XE24 437 aaKnown RBP12.24□□□□□ -0.45
LIMS4-201ENST00000413601 BRD3OSQ6XYD6 125 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 ACP7Q6ZNF0 438 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 CALHM1Q8IU99 346 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 BATF2Q8N1L9 274 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 POC1AQ8NBT0 407 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 CCDC54Q8NEL0 328 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 OR52I1Q8NGK6 324 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 ZFAND2BQ8WV99 257 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 CYGBQ8WWM9 190 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 H1FXQ92522 213 aaKnown RBP12.24□□□□□ -0.45
LIMS4-201ENST00000413601 MRPL48Q96GC5 212 aaKnown RBP12.24□□□□□ -0.45
LIMS4-201ENST00000413601 MED30Q96HR3 178 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF48Q96MX3 618 aaPredicted RBP12.24□□□□□ -0.45
LIMS4-201ENST00000413601 WDFY2Q96P53 400 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 TBX15Q96SF7 602 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 ALG8Q9BVK2 526 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 SIRPDQ9H106 197 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 CNTD2Q9H8S5 307 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 ISG20L2Q9H9L3 353 aaKnown RBP12.24□□□□□ -0.45
LIMS4-201ENST00000413601 RASL12Q9NYN1 266 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 SLC7A11Q9UPY5 501 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 RPL36Q9Y3U8 105 aaKnown RBP12.24□□□□□ -0.45
LIMS4-201ENST00000413601 SIGLEC5O15389 551 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 PGA5P0DJD9 388 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 C9orf139Q6ZV77 190 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 ZNRF1Q8ND25 227 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 LY6G5BQ8NDX9 201 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 CNIH3Q8TBE1 160 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 ADAT3Q96EY9 351 aaPredicted RBP12.23□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF649Q9BS31 505 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 DCTN5Q9BTE1 182 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 CHST5Q9GZS9 411 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 MRPS18AQ9NVS2 196 aaKnown RBP12.23□□□□□ -0.45
LIMS4-201ENST00000413601 ERVK13-1Q9NX77 482 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 SLC25A10Q9UBX3 287 aaPredicted RBP12.23□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF222Q9UK12 451 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 POLDIP2Q9Y2S7 368 aa12.23□□□□□ -0.45
LIMS4-201ENST00000413601 IGKV1-27A0A075B6S5 117 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 RFPL4AA6NLU0 287 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 OR4C45A6NMZ5 311 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 RFPL4AL1F8VTS6 287 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 GPR37O15354 613 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 NOS1APO75052 506 aaPredicted RBP12.22□□□□□ -0.45
LIMS4-201ENST00000413601 GATBO75879 557 aaKnown RBP12.22□□□□□ -0.45
LIMS4-201ENST00000413601 NXPH2O95156 264 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 SERPINA3P01011 423 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 ISG15P05161 165 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 NDUFB7P17568 137 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 MPZP25189 248 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 CCR9P51686 369 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 UBA52P62987 128 aaKnown RBP12.22□□□□□ -0.45
LIMS4-201ENST00000413601 ALKBH1Q13686 389 aaKnown RBP12.22□□□□□ -0.45
LIMS4-201ENST00000413601 SMIM21Q3B7S5 101 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 KLHL22Q53GT1 634 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 GPR157Q5UAW9 335 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF691Q5VV52 312 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 RUSC1-AS1Q66K80 236 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 SYS1Q8N2H4 156 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 CD177Q8N6Q3 437 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 PACRGLQ8N7B6 248 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 OR10AC1Q8NH08 325 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 FAM216AQ8WUB2 273 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 FGGYQ96C11 551 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 C10orf35Q96D05 121 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 DUX5Q96PT3 197 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 MYCBPQ99417 103 aaPredicted RBP12.22□□□□□ -0.45
LIMS4-201ENST00000413601 NRIP2Q9BQI9 281 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 PKIBQ9C010 78 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 ELL3Q9HB65 397 aaPredicted RBP12.22□□□□□ -0.45
LIMS4-201ENST00000413601 INPP5EQ9NRR6 644 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 ONECUT1Q9UBC0 465 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 MAB21L2Q9Y586 359 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 DSCAML1Q8TD84 2053 aa12.22□□□□□ -0.45
LIMS4-201ENST00000413601 DNHD1Q96M86 4753 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 CENPVL3A0A0U1RRI6 287 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 MDFIC2A0A1B0GVS7 189 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 DNAJC9-AS1A6NH13 148 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 E9PI62 339 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 INMTO95050 263 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF20P17024 532 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 CEBPDP49716 269 aaPredicted RBP12.21□□□□□ -0.45
LIMS4-201ENST00000413601 FUT6P51993 359 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 CAV3P56539 151 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 ACTG1P63261 375 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 ADARB1P78563 741 aaKnown RBP12.21□□□□□ -0.45
LIMS4-201ENST00000413601 IL24Q13007 206 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 BAMBIQ13145 260 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms