RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 HAAOP46952 286 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 PITPNBP48739 271 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 FUT6P51993 359 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 WNT4P56705 351 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 RPS11P62280 158 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 KCNJ8Q15842 424 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 ESCO2Q56NI9 601 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 WDR25Q64LD2 544 aaPredicted RBP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 ZNF529Q6P280 563 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 DUX4L9Q6RFH8 374 aaPredicted RBP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 C1orf229Q6ZS94 237 aaPredicted RBP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 RNF144BQ7Z419 303 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 ZFP41Q8N8Y5 198 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 POC1AQ8NBT0 407 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 DNAAF1Q8NEP3 725 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 OR8B3Q8NGG8 313 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 TRMT10AQ8TBZ6 339 aaKnown RBP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 NPRL2Q8WTW4 380 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 CNBD2Q96M20 576 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 ZNF488Q96MN9 340 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 OR8B2Q96RD0 313 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 ZNF184Q99676 751 aaPredicted RBP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 SSBP3Q9BWW4 388 aaPredicted RBP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 TMPRSS13Q9BYE2 586 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 PKIBQ9C010 78 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 COMMD4Q9H0A8 199 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 HES4Q9HCC6 221 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 CHCHD3Q9NX63 227 aaKnown RBP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 DUX4Q9UBX2 424 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 ZNF222Q9UK12 451 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 TRBV5-5A0A0J9YX44 114 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 FAM230AA0A1W2PPH8 454 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 PTGES3LE9PB15 166 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 MYL12BO14950 172 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 ADAM20O43506 726 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 SERPINA3P01011 423 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 MT-ND2P03891 347 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 ACAA1P09110 424 aaPredicted RBP10.95□□□□□ -0.66
HDAC8-210ENST00000412342 ZNF20P17024 532 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 GLRA1P23415 457 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 AZGP1P25311 298 aaKnown RBP10.95□□□□□ -0.66
HDAC8-210ENST00000412342 ERVK11-1P61568 191 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 ACSM1Q08AH1 577 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 IL24Q13007 206 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 CNN3Q15417 329 aaKnown RBP10.95□□□□□ -0.66
HDAC8-210ENST00000412342 MICBQ29980 383 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 ATPAF1Q5TC12 328 aaPredicted RBP10.95□□□□□ -0.66
HDAC8-210ENST00000412342 IL17RELQ6ZVW7 336 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 NLRC3Q7RTR2 1065 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 ANGPTL5Q86XS5 388 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 OR13C5Q8NGS8 318 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 OR13C9Q8NGT0 318 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 ANGPTL6Q8NI99 470 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 ZNF671Q8TAW3 534 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 MYDGFQ969H8 173 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 NRIP2Q9BQI9 281 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 SCN3BQ9NY72 215 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 LPAR3Q9UBY5 353 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 CDC42EP3Q9UKI2 254 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 SLC7A11Q9UPY5 501 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 DHDHQ9UQ10 334 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 ZNF281Q9Y2X9 895 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 TPRKBQ9Y3C4 175 aa10.95□□□□□ -0.66
HDAC8-210ENST00000412342 MXRA5Q9NR99 2828 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 IGKV1D-17A0A075B6S4 117 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 A0A0G2JMP0 313 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 A0A0X1KG70 313 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 C22orf46C9J442 243 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 F8VVB4 439 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 F8VWA3 439 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 DENRO43583 198 aaKnown RBP10.94□□□□□ -0.66
HDAC8-210ENST00000412342 ALX3O95076 343 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 TFF1P04155 84 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 CD1AP06126 327 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 PCMT1P22061 227 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 TAS2R43P59537 309 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 GMFBP60983 142 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 GNB2P62879 340 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 CHRFAM7AQ494W8 412 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 ACP7Q6ZNF0 438 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 ZNF788Q6ZQV5 615 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 FGFRL1Q8N441 504 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 OR4M2Q8NGB6 313 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 OR5T2Q8NGG2 359 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 GPR148Q8TDV2 347 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 TSEN15Q8WW01 171 aaKnown RBP10.94□□□□□ -0.66
HDAC8-210ENST00000412342 GHSRQ92847 366 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 SPSB1Q96BD6 273 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 BORCS8Q96FH0 119 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 OPALINQ96PE5 141 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 GAFA1Q96PS6 74 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 OR5M11Q96RB7 305 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 CCL13Q99616 98 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 SHARPINQ9H0F6 387 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 DNTTIP1Q9H147 329 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 ZCCHC4Q9H5U6 513 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 SNTG1Q9NSN8 517 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 MTCH1Q9NZJ7 389 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 NLKQ9UBE8 527 aa10.94□□□□□ -0.66
HDAC8-210ENST00000412342 CLN8Q9UBY8 286 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms