RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PNO1Q9NRX1 252 aaKnown RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMEM14BQ9NUH8 114 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMEM38BQ9NVV0 291 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 IRAK4Q9NWZ3 460 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 MRPL39Q9NYK5 338 aaKnown RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 CNOT8Q9UFF9 292 aaKnown RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 WARS2Q9UGM6 360 aaKnown RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 A4GNTQ9UNA3 340 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 MSRB2Q9Y3D2 182 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 POLR3HQ9Y535 204 aaPredicted RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM215AQ9Y5M1 114 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 WASHC2AQ641Q2 1341 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 FLT4P35916 1363 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 NOS1P29475 1434 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 TRAV19A0A0A6YYK7 116 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 A6NED7 52 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 TMEM235A6NFC5 223 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 NEMP2A6NFY4 417 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 A8MTW9 85 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 H3BPC8 53 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 TMEM189-UBE2V1I3L0A0 370 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 J3QR06 171 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 CCRL2O00421 344 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 PAPSS1O43252 624 aaPredicted RBP-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 KDELR3O43731 214 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 KERAO60938 352 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 E2F6O75461 281 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 UPK1BO75841 260 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 MAS1P04201 325 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 CTSEP14091 401 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 COX7A2P14406 83 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 ACYP2P14621 99 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 TPH1P17752 444 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 CRABP1P29762 137 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 CASP2P42575 452 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC1A3P43003 542 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 CAMPP49913 170 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 AP3M2P53677 418 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 RPL37AP61513 92 aaKnown RBP-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 RPS28P62857 69 aaKnown RBP-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 KLC1Q07866 573 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 LRRC74AQ0VAA2 488 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRAP1Q12931 704 aaKnown RBP-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 UBE2V1Q13404 147 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 KCNAB1Q14722 419 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC17A1Q14916 467 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRAM2Q15035 370 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 RAB35Q15286 201 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 STXBP2Q15833 593 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 TPD52L1Q16890 204 aaPredicted RBP-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 CFAP157Q5JU67 520 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 IBA57Q5T440 356 aaKnown RBP-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 DCAF12Q5T6F0 453 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 C1orf140Q5VVS0 124 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 TNFAIP8L2Q6P589 184 aaPredicted RBP-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 ARL9Q6T311 187 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 MACC1Q6ZN28 852 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 ATP11AUNQ6ZP68 121 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 HEATR4Q86WZ0 1026 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 SCN4BQ8IWT1 228 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 LRRC8AQ8IWT6 810 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 KATNAL2Q8IYT4 538 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 ORMDL3Q8N138 153 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 ARHGAP24Q8N264 748 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 TMEM86AQ8N2M4 240 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 LRRC25Q8N386 305 aaPredicted RBP-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 MPP5Q8N3R9 675 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 MREGQ8N565 214 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 ARL10Q8N8L6 244 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 GPR32P1Q8NGA4 272 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR6Y1Q8NGX8 325 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR9G1Q8NH87 305 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 HUS1BQ8NHY5 278 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 GIPC2Q8TF65 315 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 C4orf3Q8WVX3 66 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 ING5Q8WYH8 240 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 P2RX5Q93086 422 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 PPP1R14BQ96C90 147 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 FXYD5Q96DB9 178 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 GBP5Q96PP8 586 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 INTS14Q96SY0 518 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC39A3Q9BRY0 314 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC25A2Q9BXI2 301 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 GABARAPL1Q9H0R8 117 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 NAA60Q9H7X0 242 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 RMND5AQ9H871 391 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 MEAF6Q9HAF1 191 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 SND1-IT1Q9HBX3 110 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC35D1Q9NTN3 355 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 PTTG3PQ9NZH4 202 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 AIPL1Q9NZN9 384 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 RHCGQ9UBD6 479 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 STK39Q9UEW8 545 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 ABCF2Q9UG63 623 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 PILRBQ9UKJ0 227 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 NCKAP1Q9Y2A7 1128 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 CARD8Q9Y2G2 431 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 NSG2Q9Y328 171 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 ADCY9O60503 1353 aa-2.29□□□□□ -2.78
RNU4-88P-201ENST00000411220 PSME4Q14997 1843 aa-2.29□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms