RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 S100A11P31949 105 aa10.09□□□□□ -0.79
PRPF40A-202ENST00000410080 RPS27P42677 84 aaKnown RBP10.09□□□□□ -0.79
PRPF40A-202ENST00000410080 OR1L1Q8NH94 360 aa10.09□□□□□ -0.79
PRPF40A-202ENST00000410080 MARC2Q969Z3 335 aa10.09□□□□□ -0.79
PRPF40A-202ENST00000410080 PAPPA2Q9BXP8 1791 aa10.09□□□□□ -0.79
PRPF40A-202ENST00000410080 LIPNQ5VXI9 398 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 MUC15Q8N387 334 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 RCL1Q9Y2P8 373 aaKnown RBP10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 TRPM3Q9HCF6 1732 aaPredicted RBP10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 H3BMH7 237 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 JTBO76095 146 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 AQP8O94778 261 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 GCGP01275 180 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 FGF2P09038 288 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 Q3ZCU0 254 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 ZNF441Q8N8Z8 693 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 OR13G1Q8NGZ3 307 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 OR1F12Q8NHA8 337 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 RFESDQ8TAC1 157 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 SPACA9Q96E40 222 aaPredicted RBP10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 PSD2Q9BQI7 771 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 OR2D2Q9H210 308 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 FRG2CA6NGY1 282 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 ADAM11O75078 769 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 TMEM88Q6PEY1 159 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 PRSS3P2Q8NHM4 247 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 PHOX2AO14813 284 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 ZNF354AO60765 605 aaPredicted RBP10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 TCRBP04435 133 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 IL11RAQ14626 422 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 NCR3LG1Q68D85 454 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 OR52N4Q8NGI2 321 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 TMEM171Q8WVE6 324 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 CABLES2Q9BTV7 478 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 MMP25Q9NPA2 562 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 NDUFB11Q9NX14 153 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 NHSQ6T4R5 1651 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 FOXF1Q12946 379 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 TIPARPQ7Z3E1 657 aaKnown RBP10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 OR4C5Q8NGB2 326 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 OR5A2Q8NGI9 324 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 MIEN1Q9BRT3 115 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 TEX50A0A1B0GTY4 177 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 CPN1P15169 458 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 GNG4P50150 75 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 SULT1A1P50225 295 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 SPRED3Q2MJR0 410 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 ARIH2OSQ8N7S6 290 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 OR5AP2Q8NGF4 316 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 ZNF416Q9BWM5 594 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 SLC7A10Q9NS82 523 aa10.08□□□□□ -0.8
PRPF40A-202ENST00000410080 LMO7DNF2Z398 122 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 HMGN4O00479 90 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 HMGA1P17096 107 aaKnown RBP10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 LIPAP38571 399 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 FAM162BQ5T6X4 162 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 ABI3BPQ7Z7G0 1075 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 C20orf196Q8IYI0 205 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 TAF1LQ8IZX4 1826 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 IGHV3OR15-7A0A075B7D8 119 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 TCRBV3S1A0A5B6 114 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 PF4P02776 101 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 PCMT1P22061 227 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 OR2B8PP59922 312 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 AGBL4Q5VU57 503 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 CXorf58Q96LI9 332 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 TEX37Q96LM6 180 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 PIGMQ9H3S5 423 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 SIAH2O43255 324 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 CD276Q5ZPR3 534 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 TMEM215Q68D42 235 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 ZNF519Q8TB69 540 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 E5RGE8 158 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 ATP1B1P05026 303 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 HTR1DP28221 377 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 KLHDC8BQ8IXV7 354 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 ANGPTL6Q8NI99 470 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 MRAP2Q96G30 205 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 NSG2Q9Y328 171 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 WNT1P04628 370 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 ACSM4P0C7M7 580 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 ANKRD33Q7Z3H0 272 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 DYNC2LI1Q8TCX1 351 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 TUBA4BQ9H853 241 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 ZDHHC11Q9H8X9 412 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 NGFP01138 241 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 SCGB1A1P11684 91 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 GNG3P63215 75 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 FCRL6Q6DN72 434 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 EIF4E3Q8N5X7 224 aaKnown RBP10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 GLULP15104 373 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 KIAA0141Q14154 515 aaPredicted RBP10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 ZNF793Q6ZN11 406 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 GPX8Q8TED1 209 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 PIK3IP1Q96FE7 263 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 CACFD1Q9UGQ2 172 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 U3KQ87 197 aa10.07□□□□□ -0.8
PRPF40A-202ENST00000410080 TRAV38-1A0A0B4J264 116 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 GNG7O60262 68 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 ALPLP05186 524 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms