RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 SS18L1O75177 396 aaPredicted RBP6.49□□□□□ -1.37
CXCR4-202ENST00000409817 CNOT4O95628 575 aaKnown RBP6.49□□□□□ -1.37
CXCR4-202ENST00000409817 CSTBP04080 98 aaKnown RBP6.49□□□□□ -1.37
CXCR4-202ENST00000409817 PATE4P0C8F1 98 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 VSIG10L2P0DP72 767 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 AGTR1P30556 359 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 EIF2S3P41091 472 aaKnown RBP6.49□□□□□ -1.37
CXCR4-202ENST00000409817 OR3A2P47893 321 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 CCL11P51671 97 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 TMEM50BP56557 158 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 TAS2R46P59540 309 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 UBE2MP61081 183 aaKnown RBP6.49□□□□□ -1.37
CXCR4-202ENST00000409817 CXADRP78310 365 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 C4orf46Q504U0 113 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 PLAC9Q5JTB6 97 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 FBXW9Q5XUX1 488 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 LPCAT3Q6P1A2 487 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 ZNF767PQ75MW2 155 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 VASH2Q86V25 355 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 C9orf62Q8N4C0 152 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 ZSCAN4Q8NAM6 433 aaPredicted RBP6.49□□□□□ -1.37
CXCR4-202ENST00000409817 CSNK2A3Q8NEV1 391 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 FDCSPQ8NFU4 85 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 OR2T35Q8NGX2 323 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 OR2AE1Q8NHA4 323 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 FGFBP3Q8TAT2 258 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 NUDCD2Q8WVJ2 157 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 CMBLQ96DG6 245 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 NICN1Q9BSH3 213 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 DEFB127Q9H1M4 99 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 BANF2Q9H503 90 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 GPR173Q9NS66 373 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 B3GNT2Q9NY97 397 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 MGAT4CQ9UBM8 478 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 HSF4Q9ULV5 492 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 MGAT4AQ9UM21 535 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 KCNK7Q9Y2U2 307 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 HSPB11Q9Y547 144 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 LIPGQ9Y5X9 500 aa6.49□□□□□ -1.37
CXCR4-202ENST00000409817 VPS13AQ96RL7 3174 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 CEACAM18A8MTB9 384 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 M0QYG6 137 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 SSX5O60225 188 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 IGHV3-9P01782 118 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 FCER2P06734 321 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 OR4E1P0C645 316 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 TMEM225BP0DP42 221 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 SERPINA2P20848 420 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 BLVRBP30043 206 aaPredicted RBP6.48□□□□□ -1.37
CXCR4-202ENST00000409817 TAS2R31P59538 309 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 DHODHQ02127 395 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 TGFBR3Q03167 851 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 ZNF92Q03936 586 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 ARFRP1Q13795 201 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 RSU1Q15404 277 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 ATPAF1Q5TC12 328 aaPredicted RBP6.48□□□□□ -1.37
CXCR4-202ENST00000409817 LAMTOR1Q6IAA8 161 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 TMEM17Q86X19 198 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 HOGA1Q86XE5 327 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 CPEB3Q8NE35 698 aaKnown RBP6.48□□□□□ -1.37
CXCR4-202ENST00000409817 OR2AK2Q8NG84 335 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 OR13C8Q8NGS7 320 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 OR4K15Q8NH41 348 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 NPRL2Q8WTW4 380 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 ST8SIA4Q92187 359 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 SARAFQ96BY9 339 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 ARHGAP5-AS1Q96IT6 56 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 SLC6A7Q99884 636 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 POFUT1Q9H488 388 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 PLSCR3Q9NRY6 295 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 SPRR3Q9UBC9 169 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 EIF3KQ9UBQ5 218 aaKnown RBP6.48□□□□□ -1.37
CXCR4-202ENST00000409817 ELF5Q9UKW6 265 aaPredicted RBP6.48□□□□□ -1.37
CXCR4-202ENST00000409817 EDARQ9UNE0 448 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 DNAJC13O75165 2243 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 PTPRBP23467 1997 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 ZNF407Q9C0G0 2248 aa6.48□□□□□ -1.37
CXCR4-202ENST00000409817 CST4P01036 141 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 H2AFB1P0C5Y9 115 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 S100A1P23297 94 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 HRH1P35367 487 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 PMELP40967 661 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 NOVA1P51513 510 aaKnown RBP6.47□□□□□ -1.37
CXCR4-202ENST00000409817 RAB1AP62820 205 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 SCGB2B2Q4G0G5 96 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 NKAPLQ5M9Q1 402 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 NSUN5P2Q63ZY6 315 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 NUFIP2Q7Z417 695 aaKnown RBP6.47□□□□□ -1.37
CXCR4-202ENST00000409817 RNF144BQ7Z419 303 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 P4HA3Q7Z4N8 544 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 C1QL2Q7Z5L3 287 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 SLC25A42Q86VD7 318 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 SAXO1Q8IYX7 474 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 MUC20Q8N307 709 aaPredicted RBP6.47□□□□□ -1.37
CXCR4-202ENST00000409817 C12orf45Q8N5I9 185 aaPredicted RBP6.47□□□□□ -1.37
CXCR4-202ENST00000409817 OR4S1Q8NGB4 309 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 OR5D18Q8NGL1 313 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 OR5L1Q8NGL2 311 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 OR1K1Q8NGR3 316 aa6.47□□□□□ -1.37
CXCR4-202ENST00000409817 TERB2Q8NHR7 220 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms