RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 FAM120AOSQ5T036 256 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 OR4M2Q8NGB6 313 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 OR5D14Q8NGL3 314 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 TSEN15Q8WW01 171 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 GHSRQ92847 366 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 SEH1LQ96EE3 360 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 BORCS8Q96FH0 119 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 MND1Q9BWT6 205 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 SSBP3Q9BWW4 388 aaPredicted RBP16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 PKIBQ9C010 78 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 Q9H521 79 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 KAAG1Q9UBP8 84 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 DNAJB11Q9UBS4 358 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 ANK3Q12955 4377 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 IGKV1-27A0A075B6S5 117 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 PHF1O43189 567 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 SYNGR1O43759 233 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 MT-ND2P03891 347 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 GATA3P23771 443 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 GMFBP60983 142 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 ZNF841Q6ZN19 808 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 ANGPTL5Q86XS5 388 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 CALHM1Q8IU99 346 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 SERPINA12Q8IW75 414 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 SPSB1Q96BD6 273 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 BEX2Q9BXY8 128 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 SHARPINQ9H0F6 387 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 ZCCHC4Q9H5U6 513 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 RASL12Q9NYN1 266 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 LPAR3Q9UBY5 353 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 CLN8Q9UBY8 286 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 ADAM20O43506 726 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 DENRO43583 198 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 RGS10O43665 173 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 NOS1APO75052 506 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 ALX3O95076 343 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 ACAA1P09110 424 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 PGA5P0DJD9 388 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 HOXB4P17483 251 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 GLRA1P23415 457 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 RBP2P50120 134 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 NPY4RP50391 375 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 GNB2P62879 340 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 BDH1Q02338 343 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 IL24Q13007 206 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 IRF3Q14653 427 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 CHRFAM7AQ494W8 412 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 RBM48Q5RL73 367 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 ATPAF1Q5TC12 328 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 STUMQ69YW2 141 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 FAHD2BQ6P2I3 314 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 ZFP41Q8N8Y5 198 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 POC1AQ8NBT0 407 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 OR13C9Q8NGT0 318 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 FAHD2AQ96GK7 314 aa16.54■□□□□ 0.24
PDLIM2-207ENST00000409417 ARHGAP32A7KAX9 2087 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 TMPRSS2O15393 492 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 CD2P06729 351 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 OCM2P0CE71 109 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 OCMP0CE72 109 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 HNF1AP20823 631 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 AZGP1P25311 298 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 ATP1B3P54709 279 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 MTCP1P56278 107 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 ACSM1Q08AH1 577 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 DCAF12L2Q5VW00 463 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 WDR25Q64LD2 544 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 OR5T2Q8NGG2 359 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 TMIGD2Q96BF3 282 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 PGLYRP3Q96LB9 341 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 OPALINQ96PE5 141 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 NRIP2Q9BQI9 281 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 DNTTIP1Q9H147 329 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 MMP26Q9NRE1 261 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 NLKQ9UBE8 527 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 CTSZQ9UBR2 303 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 OR5V1Q9UGF6 321 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 BLOC1S6Q9UL45 172 aa16.53■□□□□ 0.24
PDLIM2-207ENST00000409417 MXRA5Q9NR99 2828 aa16.52■□□□□ 0.24
PDLIM2-207ENST00000409417 TRAPPC2LH3BP13 241 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 J3QLI3 93 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 CD1AP06126 327 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 CELP19835 753 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 SOX2P48431 317 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 DOC2BQ14184 412 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 SMIM21Q3B7S5 101 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 YIF1BQ5BJH7 314 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 LHFPL2Q6ZUX7 228 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 PRSS48Q7RTY5 328 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 CCL13Q99616 98 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 NEK6Q9HC98 313 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 SNTG1Q9NSN8 517 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 LSM2Q9Y333 95 aaKnown RBP16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 DOCK11Q5JSL3 2073 aa16.52■□□□□ 0.23
PDLIM2-207ENST00000409417 OR2AT4A6NND4 320 aa16.51■□□□□ 0.23
PDLIM2-207ENST00000409417 SULT1B1O43704 296 aa16.51■□□□□ 0.23
PDLIM2-207ENST00000409417 ERVK11-1P61568 191 aa16.51■□□□□ 0.23
PDLIM2-207ENST00000409417 SPHARQ15513 63 aa16.51■□□□□ 0.23
PDLIM2-207ENST00000409417 ZNF529Q6P280 563 aa16.51■□□□□ 0.23
PDLIM2-207ENST00000409417 ACP7Q6ZNF0 438 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms