RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 A0A1W2PQM1 296 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF724A8MTY0 619 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 H3BP45 60 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 CST7O76096 145 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 ONECUT2O95948 504 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 IL12BP29460 328 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 CX3CR1P49238 355 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 RBP2P50120 134 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 SSTP61278 116 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 GLO1Q04760 184 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 TMEM244Q5VVB8 128 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 CADM4Q8NFZ8 388 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 PTPMT1Q8WUK0 201 aaPredicted RBP11.44□□□□□ -0.58
PTPRN-202ENST00000409251 MRGPRFQ96AM1 343 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 ADAT3Q96EY9 351 aaPredicted RBP11.44□□□□□ -0.58
PTPRN-202ENST00000409251 C2orf50Q96LR7 162 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 C1orf198Q9H425 327 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 OCIAD1Q9NX40 245 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 SLC7A11Q9UPY5 501 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 TERTO14746 1132 aaKnown RBP11.44□□□□□ -0.58
PTPRN-202ENST00000409251 GLB1P16278 677 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 AGAP20933 346 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 POU3F1Q03052 451 aaPredicted RBP11.44□□□□□ -0.58
PTPRN-202ENST00000409251 GGTLC2Q14390 218 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 KHDC3LQ587J8 217 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 EEF1A1P5Q5VTE0 462 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 VSTM2LQ96N03 204 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 PBDC1Q9BVG4 233 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 VN1R1Q9GZP7 353 aa11.44□□□□□ -0.58
PTPRN-202ENST00000409251 IGKV1D-42A0A075B6H8 117 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 TRBV5-7A0A0A0MS05 114 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 RPS23P62266 143 aaKnown RBP11.43□□□□□ -0.58
PTPRN-202ENST00000409251 RAB11AP62491 216 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 SPIN3Q5JUX0 258 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF595Q8IYB9 648 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 ARRDC1Q8N5I2 433 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 STT3BQ8TCJ2 826 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 RNF166Q96A37 237 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-202ENST00000409251 C19orf12Q9NSK7 152 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 SLC5A6Q9Y289 635 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 IFNA10P01566 189 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 SOD3P08294 240 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 CCL4P13236 92 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 SPINK2P20155 84 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 RRADP55042 308 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 UNC119Q13432 240 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 GPR157Q5UAW9 335 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 EDAQ92838 391 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF2Q9BSG1 426 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-202ENST00000409251 SLC5A7Q9GZV3 580 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 SCRG1O75711 98 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 HEXAP06865 529 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 FCGR3AP08637 254 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 TMEM225BP0DP42 221 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 GPR3P46089 330 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 CEBPEQ15744 281 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 WBP2NLQ6ICG8 309 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 PAQR4Q8N4S7 273 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-202ENST00000409251 OR2G3Q8NGZ4 309 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 PACRGQ96M98 296 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF426Q9BUY5 554 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 SLCO5A1Q9H2Y9 848 aa11.43□□□□□ -0.58
PTPRN-202ENST00000409251 NPIPA5E9PKD4 350 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 CST4P01036 141 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 CXCL1P09341 107 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 IL11P20809 199 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 CDAP32320 146 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 PLCXD2Q0VAA5 305 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 SHBQ15464 509 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 GGNBP1Q5YKI7 109 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 SGPP2Q8IWX5 399 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 OR2AJ1Q8NGZ0 328 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 DYRK2Q92630 601 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 PIGTQ969N2 578 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 RAB39BQ96DA2 213 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 PRRX2Q99811 253 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 NPIPA1Q9UND3 350 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 CLDN16Q9Y5I7 305 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 SFT2D2O95562 160 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 HKR1P10072 659 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 HTR5AP47898 357 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 TAS2R31P59538 309 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 CCL20P78556 96 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF260Q3ZCT1 412 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 FBXW12Q6X9E4 464 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 STACQ99469 402 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 SLC35B3Q9H1N7 401 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF407Q9C0G0 2248 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 ADAMTS9Q9P2N4 1935 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 H3BQ15 152 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 HMGB3O15347 200 aaKnown RBP11.42□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF264O43296 627 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 JTBO76095 146 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 NKX2-2O95096 273 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 AK1P00568 194 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 CELA2AP08217 269 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 PGA4P0DJD7 388 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 PGA5P0DJD9 388 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 IDH3GP51553 393 aaPredicted RBP11.42□□□□□ -0.58
PTPRN-202ENST00000409251 RUNX1Q01196 453 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms