RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 DMXL1Q9Y485 3027 aa3.81□□□□□ -1.8
SMC6-203ENST00000402989 COL5A1P20908 1838 aaPredicted RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 LOC105371267A0A1B0GV96 52 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 A0A1B0GW55 424 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 ATP6V1G2-DDX39BF2Z307 99 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 H0YIZ8 118 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 TOR1AO14656 332 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 EIF1BO60739 113 aaKnown RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 TMEM127O75204 238 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 GSTP1P09211 210 aaKnown RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 DUX4L2P0CJ85 424 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 DUX4L3P0CJ86 424 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 DUX4L4P0CJ87 422 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 DUX4L5P0CJ88 424 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 DUX4L6P0CJ89 424 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 DUX4L7P0CJ90 424 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 CPT2P23786 658 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 AKR1C3P42330 323 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 MECP2P51608 486 aaKnown RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 PPIAP62937 165 aaKnown RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 SRSF3P84103 164 aaKnown RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 IL11RAQ14626 422 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 MPPED2Q15777 294 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 RSPO1Q2MKA7 263 aaPredicted RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 PLEKHN1Q494U1 663 aaPredicted RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 SPATA46Q5T0L3 261 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 PDSS1Q5T2R2 415 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 DCAF12Q5T6F0 453 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 ATP1A1-AS1Q5TC04 95 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 OR2A2Q6IF42 318 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 RAB11FIP2Q7L804 512 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 TIPARPQ7Z3E1 657 aaKnown RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 LYPD6Q86Y78 171 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 PRR18Q8N4B5 295 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 ZDHHC22Q8N966 263 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 ZIC4Q8N9L1 334 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 OR11L1Q8NGX0 322 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 NABP1Q96AH0 204 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 FOXB1Q99853 325 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 ALX4Q9H161 411 aaPredicted RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 LRFN1Q9P244 771 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 DUX4Q9UBX2 424 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 AK3Q9UIJ7 227 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 TNRC6BQ9UPQ9 1833 aaKnown RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 TRAV39A0A0B4J263 110 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 TTLL8A6PVC2 850 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 MFNGO00587 321 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 CBR3O75828 277 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 OR2F2O95006 317 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 CER1O95813 267 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 NRASP01111 189 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 HOXD4P09016 255 aaPredicted RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 OR5H8P0DN80 308 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 FGF5P12034 268 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 PTGER4P35408 488 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 CEBPGP53567 150 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 MLF1P58340 268 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 PSG4Q00888 419 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 ZNF92Q03936 586 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 OR2F1Q13607 317 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 SLC25A53Q5H9E4 307 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 RPL7L1Q6DKI1 246 aaKnown RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 SLC25A26Q70HW3 274 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 DTWD2Q8NBA8 298 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 OR6S1Q8NH40 331 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 OR1F12Q8NHA8 337 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 MRPL24Q96A35 216 aaKnown RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 SULT4A1Q9BR01 284 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 EDEM2Q9BV94 578 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 ANGPTL4Q9BY76 406 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 METTL9Q9H1A3 318 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 TCFL5Q9UL49 500 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 IGKV1-27A0A075B6S5 117 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 PRSS47A8MTI9 375 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 ZNF587BE7ETH6 402 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 F8W036 122 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 LRP3O75074 770 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 MED6O75586 246 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 SFT2D2O95562 160 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 HPP00738 406 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 CD63P08962 238 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 CNR1P21554 472 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 OMGP23515 440 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 THBS4P35443 961 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 NPBWR2P48146 333 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 CYB561P49447 251 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 DUSP3P51452 185 aaPredicted RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 AKR1D1P51857 326 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 PIGPP57054 158 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 TAS2R31P59538 309 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 RAC1P63000 192 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 SUPT4H1P63272 117 aaKnown RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 BLOC1S1P78537 153 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 ZNF616Q08AN1 781 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 RIPPLY1Q0D2K3 151 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 GUCA2BQ16661 112 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 PABPC1L2AQ5JQF8 200 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 PPP1R32Q7Z5V6 425 aa3.8□□□□□ -1.8
SMC6-203ENST00000402989 MYPOPQ86VE0 399 aaPredicted RBP3.8□□□□□ -1.8
SMC6-203ENST00000402989 CBLN2Q8IUK8 224 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms