RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 PDZK1IP1Q13113 114 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 FAM89BQ8N5H3 189 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 OR5H2Q8NGV7 314 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ROBO4Q8WZ75 1007 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TMEM230Q96A57 120 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 GUCD1Q96NT3 240 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 OCSTAMPQ9BR26 566 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 CHST5Q9GZS9 411 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 CRLF2Q9HC73 371 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ARID1AO14497 2285 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 KANTRA0A1W2PQU2 76 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TMEM218A2RU14 115 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ZNF729A6NN14 1252 aaPredicted RBP16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 F12P00748 615 aaPredicted RBP16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 SERPINF1P36955 418 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 SLC9A3R2Q15599 337 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 OR2B11Q5JQS5 317 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 VAX1Q5SQQ9 334 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 PEAR1Q5VY43 1037 aaPredicted RBP16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 PPP1R32Q7Z5V6 425 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 C20orf196Q8IYI0 205 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ALKBH3Q96Q83 286 aaPredicted RBP16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 GPR132Q9UNW8 380 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 CCDC187A0A096LP49 1063 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 P04436 131 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 CNR1P21554 472 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 SNU13P55769 128 aaKnown RBP16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 RAB5BP61020 215 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 HABP2Q14520 560 aaPredicted RBP16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 PNLIPRP3Q17RR3 467 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 S100A13Q99584 98 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ZNF471Q9BX82 626 aaPredicted RBP16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 GPR173Q9NS66 373 aa16.03■□□□□ 0.16
CHRFAM7A-202ENST00000397827 HPNP05981 417 aa16.02■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TCN2P20062 427 aa16.02■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ACKR3P25106 362 aa16.02■□□□□ 0.16
CHRFAM7A-202ENST00000397827 RAC3P60763 192 aa16.02■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TMEM128Q5BJH2 165 aa16.02■□□□□ 0.16
CHRFAM7A-202ENST00000397827 FAM27BQ5VT28 67 aa16.02■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TCEAL6Q6IPX3 200 aa16.02■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ARRDC1Q8N5I2 433 aa16.02■□□□□ 0.16
CHRFAM7A-202ENST00000397827 GTF3AQ92664 365 aaKnown RBP16.02■□□□□ 0.16
CHRFAM7A-202ENST00000397827 C19orf67A6NJJ6 358 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 DBX1A6NMT0 343 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 GPR37O15354 613 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TRAPPC6AO75865 159 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 OR2F2O95006 317 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ADCYAP1P18509 176 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 OR3A2P47893 321 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CARD18P57730 90 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 UBA52P62987 128 aaKnown RBP16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 HGFACQ04756 655 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 OR2F1Q13607 317 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ZNF774Q6NX45 483 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 DMRTC2Q8IXT2 367 aaPredicted RBP16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CSNK2A3Q8NEV1 391 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 OR13G1Q8NGZ3 307 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PP6455Q8WZ26 134 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 HAS2Q92819 552 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SPTSSAQ969W0 71 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SGCZQ96LD1 299 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PECRQ9BY49 303 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SEBOXQ9HB31 216 aaPredicted RBP16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 UFSP2Q9NUQ7 469 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 RASL12Q9NYN1 266 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TCFL5Q9UL49 500 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 FLVCR1Q9Y5Y0 555 aa16.02■□□□□ 0.15
CHRFAM7A-202ENST00000397827 FOXI3A8MTJ6 420 aaPredicted RBP16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CXCL13O43927 109 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ADAP1O75689 374 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 B4GALT1P15291 398 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 GABRR1P24046 479 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SUCLG1P53597 346 aaKnown RBP16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 MRPS34P82930 218 aaKnown RBP16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ZNF345Q14585 488 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ACOT7LQ6ZUV0 252 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 C6orf201Q7Z4U5 140 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 GGNQ86UU5 652 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PCDHGA1Q9Y5H4 931 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 C5orf52A6NGY3 159 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 BCL2L11O43521 198 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 WIPI1Q5MNZ9 446 aaPredicted RBP16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CLEC18BQ6UXF7 455 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 GALNTL5Q7Z4T8 443 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 FAM219AQ8IW50 185 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ZNF701Q9NV72 531 aaPredicted RBP16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PADI1Q9ULC6 663 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 GPR179Q6PRD1 2367 aa16.01■□□□□ 0.15
CHRFAM7A-202ENST00000397827 GJE1A6NN92 205 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ANGPTL7O43827 346 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 GP1BAP07359 652 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SRD5A2P31213 254 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TAS2R31P59538 309 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 DEFA6Q01524 100 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CHAF1BQ13112 559 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 FAM189A2Q15884 450 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 EIF2S3LQ2VIR3 472 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ACTBL2Q562R1 376 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 AADACL3Q5VUY0 350 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms