RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 RPS27AP62979 156 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-204ENST00000397404 NHLRC3Q5JS37 347 aa16.23■□□□□ 0.19
TSPAN4-204ENST00000397404 FAM89BQ8N5H3 189 aa16.23■□□□□ 0.19
TSPAN4-204ENST00000397404 OR51F2Q8NH61 342 aa16.23■□□□□ 0.19
TSPAN4-204ENST00000397404 ERGIC1Q969X5 290 aa16.23■□□□□ 0.19
TSPAN4-204ENST00000397404 OR51I2Q9H344 312 aa16.23■□□□□ 0.19
TSPAN4-204ENST00000397404 SCPEP1Q9HB40 452 aa16.23■□□□□ 0.19
TSPAN4-204ENST00000397404 DUSP13Q9UII6 198 aa16.23■□□□□ 0.19
TSPAN4-204ENST00000397404 KLF2Q9Y5W3 355 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-204ENST00000397404 ATP23Q9Y6H3 246 aa16.23■□□□□ 0.19
TSPAN4-204ENST00000397404 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 CRTAPO75718 401 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 PTBP3O95758 552 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 KIR2DL3P43628 341 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 SCN1BQ07699 218 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 UNC119Q13432 240 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 SLC22A6Q4U2R8 563 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 TLNRD1Q9H1K6 362 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 ZFYVE26Q68DK2 2539 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 TRAPPC2LH3BP13 241 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 GABARAPH6UMI1 98 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 HLA-DQB1P01920 261 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 MGMTP16455 207 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 APOBEC3AP31941 199 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 PRSS12P56730 875 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 EFNB3Q15768 340 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 TRIQKQ629K1 86 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 OSR2Q8N2R0 312 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 LINC01560Q8TB33 94 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 TMEM204Q9BSN7 226 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 ELL3Q9HB65 397 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 PRR14LQ5THK1 2151 aa16.22■□□□□ 0.19
TSPAN4-204ENST00000397404 HCFC1P51610 2035 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 SHISA9B4DS77 424 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 J3QRK9 145 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 NOS1APO75052 506 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 C1QL1O75973 258 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 MPIG6BO95866 241 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 GSTP1P09211 210 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 SRP9P49458 86 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 ADAM5Q6NVV9 412 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 SLC25A26Q70HW3 274 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 OR5D18Q8NGL1 313 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 SMIM4Q8WVI0 70 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 RFT1Q96AA3 541 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 LPAR5Q9H1C0 372 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 TAAR3PQ9P1P4 343 aa16.21■□□□□ 0.19
TSPAN4-204ENST00000397404 CADP27708 2225 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 A0A0G2JMP0 313 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 A0A0X1KG70 313 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 WIPF3A6NGB9 483 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 B9A039 149 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 RAB27BO00194 218 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 LILRA1O75019 489 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 CA11O75493 328 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 IGFBP2P18065 325 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 SERPINF1P36955 418 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 PMELP40967 661 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 GATA4P43694 442 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 PTH2RP49190 550 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 TAS2R20P59543 309 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 AP3S2P59780 193 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 NKPD1Q17RQ9 610 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 PNLIPRP3Q17RR3 467 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 FIP1L1Q6UN15 594 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 CALHM1Q8IU99 346 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 OR8H2Q8N162 312 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 MINDY2Q8NBR6 621 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 C19orf18Q8NEA5 215 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 OR4M2Q8NGB6 313 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 OR51T1Q8NGJ9 327 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 OR10R2Q8NGX6 335 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 Q96M66 194 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 GAL3ST1Q99999 423 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 MRPL37Q9BZE1 423 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 SPACA1Q9HBV2 294 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 NPDC1Q9NQX5 325 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 TAS2R8Q9NYW2 309 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 IL19Q9UHD0 177 aa16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 ZNF107Q9UII5 783 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-204ENST00000397404 MLNRO43193 412 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 ECDO95905 644 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 MELTFP08582 738 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 OR4A8P0C604 315 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 GSTT2BP0CG30 244 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 SERPINA2P20848 420 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 CFHR2P36980 270 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 INPP1P49441 399 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 ZNF81P51508 661 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 EFNB2P52799 333 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 FGF12P61328 243 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 CDSNQ15517 529 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 ADIPOQQ15848 244 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 MPV17LQ2QL34 196 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 ALKBH6Q3KRA9 238 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 HAGHLQ6PII5 290 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 VHLLQ6RSH7 139 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 DNM1P46Q6ZS02 220 aa16.19■□□□□ 0.18
TSPAN4-204ENST00000397404 C1QL2Q7Z5L3 287 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms